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Database: UniProt
Entry: A0A3Q2IAZ4_HORSE
LinkDB: A0A3Q2IAZ4_HORSE
Original site: A0A3Q2IAZ4_HORSE 
ID   A0A3Q2IAZ4_HORSE        Unreviewed;      2363 AA.
AC   A0A3Q2IAZ4;
DT   10-APR-2019, integrated into UniProtKB/TrEMBL.
DT   13-SEP-2023, sequence version 2.
DT   24-JAN-2024, entry version 20.
DE   SubName: Full=Tetratricopeptide repeat domain 28 {ECO:0000313|Ensembl:ENSECAP00000045250.2};
GN   Name=TTC28 {ECO:0000313|Ensembl:ENSECAP00000045250.2,
GN   ECO:0000313|VGNC:VGNC:24621};
OS   Equus caballus (Horse).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus.
OX   NCBI_TaxID=9796 {ECO:0000313|Ensembl:ENSECAP00000045250.2, ECO:0000313|Proteomes:UP000002281};
RN   [1] {ECO:0000313|Ensembl:ENSECAP00000045250.2, ECO:0000313|Proteomes:UP000002281}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Thoroughbred {ECO:0000313|Ensembl:ENSECAP00000045250.2,
RC   ECO:0000313|Proteomes:UP000002281};
RX   PubMed=19892987; DOI=10.1126/science.1178158;
RG   Broad Institute Genome Sequencing Platform;
RG   Broad Institute Whole Genome Assembly Team;
RA   Wade C.M., Giulotto E., Sigurdsson S., Zoli M., Gnerre S., Imsland F.,
RA   Lear T.L., Adelson D.L., Bailey E., Bellone R.R., Bloecker H., Distl O.,
RA   Edgar R.C., Garber M., Leeb T., Mauceli E., MacLeod J.N., Penedo M.C.T.,
RA   Raison J.M., Sharpe T., Vogel J., Andersson L., Antczak D.F., Biagi T.,
RA   Binns M.M., Chowdhary B.P., Coleman S.J., Della Valle G., Fryc S.,
RA   Guerin G., Hasegawa T., Hill E.W., Jurka J., Kiialainen A., Lindgren G.,
RA   Liu J., Magnani E., Mickelson J.R., Murray J., Nergadze S.G., Onofrio R.,
RA   Pedroni S., Piras M.F., Raudsepp T., Rocchi M., Roeed K.H., Ryder O.A.,
RA   Searle S., Skow L., Swinburne J.E., Syvaenen A.C., Tozaki T., Valberg S.J.,
RA   Vaudin M., White J.R., Zody M.C., Lander E.S., Lindblad-Toh K.;
RT   "Genome sequence, comparative analysis, and population genetics of the
RT   domestic horse.";
RL   Science 326:865-867(2009).
RN   [2] {ECO:0000313|Ensembl:ENSECAP00000045250.2}
RP   IDENTIFICATION.
RC   STRAIN=Thoroughbred {ECO:0000313|Ensembl:ENSECAP00000045250.2};
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
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DR   Ensembl; ENSECAT00000048780.2; ENSECAP00000045250.2; ENSECAG00000001164.4.
DR   VGNC; VGNC:24621; TTC28.
DR   GeneTree; ENSGT00940000156428; -.
DR   Proteomes; UP000002281; Chromosome 8.
DR   Bgee; ENSECAG00000001164; Expressed in articular cartilage of joint and 24 other cell types or tissues.
DR   ExpressionAtlas; A0A3Q2IAZ4; baseline.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR   InterPro; IPR024983; CHAT_dom.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR019734; TPR_repeat.
DR   PANTHER; PTHR10098; RAPSYN-RELATED; 1.
DR   PANTHER; PTHR10098:SF106; TETRATRICOPEPTIDE REPEAT PROTEIN 28; 1.
DR   Pfam; PF12770; CHAT; 1.
DR   Pfam; PF13424; TPR_12; 9.
DR   Pfam; PF13176; TPR_7; 3.
DR   SMART; SM00028; TPR; 23.
DR   SUPFAM; SSF48452; TPR-like; 6.
DR   PROSITE; PS50005; TPR; 12.
DR   PROSITE; PS50293; TPR_REGION; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002281};
KW   TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT   REPEAT          8..41
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          196..229
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          236..269
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          276..309
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          396..429
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          476..509
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          516..549
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          636..669
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          759..792
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          839..872
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          879..912
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   REPEAT          959..992
FT                   /note="TPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT   DOMAIN          1273..1595
FT                   /note="CHAT"
FT                   /evidence="ECO:0000259|Pfam:PF12770"
FT   REGION          1886..1939
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1957..2221
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          2329..2349
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          852..879
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        1973..2030
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        2063..2110
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        2122..2168
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        2177..2216
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   2363 AA;  258284 MW;  3060B06182744774 CRC64;
     MMKWQPRKKA YFRQGVALQY LGRHADALAA FASGLAQDPK SLQLLVGMVE AAMKSPMRDS
     LEPTYQQLQK MKLDKSPFVV VSVVGQELLT AGHHGASVVV LEAALKIGTC SLKLRGSVFS
     ALSSAYWSLG NTEKSTGYMQ QDLDVAKTLG DQTGECRAHG NLGSAFFSKG NYREALTNHR
     HQLVLAMKLK DREAASSALS SLGHVYTAIG DYPNALASHK QCVLLAKQSK DELSEARELG
     NMGAVYIAMG DFENAVQCHE QHLKIAKDLG NKREEARAYS NLGSAYHYRR NFDKAMSYHN
     YVLELAQELM EKAIEMRAYA GLGHAARCMQ DLERAKQYHE QQLGIAEDLK DRAAEGRASS
     NLGIIHQMKG DYDTALKLHK THLCIAQELS DYAAQGRAYG NMGNAYNALG MYDQAVKYHR
     QELQISMEVN DRASQASTHG NLAVAYQALG AHDRALQHYQ NHLNIARELR DIQSEARALS
     NLGNFHCSRG EYVQAAPYYE QYLRLAPDLQ DMEGEGKVCH NLGYAHYCLG HYQEAVRYYE
     QDLALAKDLH DKLSQAKAYC NLGLAFKALL NFNKAEECQK YLLSLAQSLN NSQAKFRALG
     NLGDIFICKK DINGAIKFYE QQLGLAHHVK DRRLEASAYA ALGTAYRMIQ KYDKALGYHT
     QELEVYQELS DLPGECRAHG HLAAVYMALG KYTMAFKCYE EQLDLGQKLK DPSLEAQVYG
     NMGITKMNMN VMEEAIGYFE QQLAMLQQLS GNESVLDRGR AYGNLGDCYE ALGDYEEAIK
     YYEQYLSVAQ SLNRMQDQAK AYRGLGNGHR AMGSLQQALV CFEKRLVVAH ELGEAFNKAQ
     AYGELGSLHS QLGNYEQAIS CLERQLNIAR EMKDRALESD AACGLGGVYQ QMGEYDTALQ
     YHQLDLQIAE ETNNPTCQGR AYGNLGLTYE SLGTFERAVV YQEQHLSIAA QMNDLVAKTV
     SYSSLGRTHH ALQNYSQAVM YLQEGLRLAE QLGRREDEAK IRHGLGLSLW ASGNLEEAQR
     QLYRASALFE TIRHEAQLST DYKLSLFDLQ TSSYQALQRV LVSLGHHDEA LAVAERGRTR
     AFADLLVERQ TGQQDSDPYS PVTIDQILEM VNGQRGLVLY YSLAAGYLYS WLLAPGAGIL
     KFHEHYLGDN TVENSSDFQA GSNATLPTAT SSALEQHVTS VREALGVESY YSRACASSET
     ESEAGDIMDQ QFEEMNNKLN SVTDPTGFLR MVRRNNLFNR SCQSMTSLVS NTMSPIKDGT
     SSLPRRQSSF ARPPLRALYD LLIAPMEGGL MHSSGPVGRH RQLILVLEGE LYLIPFALLK
     GSSSNEYLYE RFALIAVPSL RSLSPQSKSH LRKNPPAYSS STSMAAVIGN PKLPSAVMDR
     WLWGPMPSAE EEAYMVSELL GCQPLVGSVA TKERVMSALT QAECVHFATH ISWKLSALVL
     TPSVDGNPAS SKSSFGHPYT IPESLRVQDD ASDGESISDC PPLQELLLTA ADVLDLRLPV
     KLVVLGSSQE SSSRVTADGV IALTRAFLAA GAQCVLVSLW PVPVAASKMF LHAFYSSLLN
     GLKASAALGE AMKVVQSSKA FSNPANWAGF LLIGSDVKLN SPSSLIGQAL TEILQHPERA
     RDALRVLLHL VEKSLQRIQN GQRNAMYTSQ QSVENKVGGI PGWQALLTAV GFRLDPPASG
     LPAAVFFPTS DPGDRLQQCS STIQSLLGLP NPALQALCKL ITASETGEQL ISRAVKNMVG
     MLHQVLVQLQ AGEKEQDFAS APIQVSISVQ LWRLPGCHEF LAALGFDLCE VGQEEVILKT
     GKQANRRTMH FALQALLALF DSTELPKRLS LDSSSSLESL ASAQSVSNAL PLGYQHPPFS
     PTGADSIASD AISVYSLSSI ASSMSFVSKP EGGSEGGGPR GRQDYDRAKN AYPQRATLPR
     SPLSPQTRPA GSKDEEEYEG FSIISTEPLA AYQENRKTRF SPDHKQSRVG TAGGVKVSVS
     SKGSISTPNS PVKMTLIPSP NSPFQKVGKL ASSDTGESDQ SSTETDSTVK SQEESNPKLD
     PQELAQKILE ETQSHLIAVE RLQRGGSQTS KSSNPEDGIS MPNSAAVFRA SETSAFSRPA
     LSHQKSQPSP VTVKPKPPAR SSSLPKVSSG YSSPTTSEAS IKDSPSQHSG RPSPGSDSQT
     SLTEQPLFKL KYPSSPYSAH ISKSPRNMSP SSGHQSPAGS APSPALSYSS AGSARSSPAD
     APDIDKLKMA AIDEKVQAVH NLKMFWQSTP QHSTGPMKIF RGTPGTMTSK RDVLSLLNLS
     PRHNKKEEGV DKLELKELSL QQHGETPHKA PPNGHWRTET TTLSTLPLPA GPPAAAPTRP
     LRLPSGNGYK FLSPGRFFPS SKC
//
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