ID A0A3Q2X994_HAPBU Unreviewed; 1242 AA.
AC A0A3Q2X994;
DT 10-APR-2019, integrated into UniProtKB/TrEMBL.
DT 10-APR-2019, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE SubName: Full=Ski2 like RNA helicase {ECO:0000313|Ensembl:ENSHBUP00000035506.1};
OS Haplochromis burtoni (Burton's mouthbrooder) (Chromis burtoni).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids;
OC Pseudocrenilabrinae; Haplochromini; Haplochromis.
OX NCBI_TaxID=8153 {ECO:0000313|Ensembl:ENSHBUP00000035506.1, ECO:0000313|Proteomes:UP000264840};
RN [1] {ECO:0000313|Ensembl:ENSHBUP00000035506.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_005936320.1; XM_005936258.2.
DR AlphaFoldDB; A0A3Q2X994; -.
DR STRING; 8153.ENSHBUP00000035506; -.
DR Ensembl; ENSHBUT00000031250.1; ENSHBUP00000035506.1; ENSHBUG00000000726.1.
DR GeneID; 102313688; -.
DR CTD; 6499; -.
DR GeneTree; ENSGT00940000158255; -.
DR OMA; CGSDITR; -.
DR OrthoDB; 1352at2759; -.
DR Proteomes; UP000264840; Unplaced.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR GO; GO:0006401; P:RNA catabolic process; IEA:InterPro.
DR CDD; cd18027; DEXHc_SKIV2L; 1.
DR CDD; cd18795; SF2_C_Ski2; 1.
DR Gene3D; 1.10.3380.30; -; 2.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR048392; MTR4-like_stalk.
DR InterPro; IPR025696; MTR4_beta-barrel.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR016438; SKI2-like.
DR InterPro; IPR012961; Ski2/MTR4_C.
DR InterPro; IPR040801; Ski2_N.
DR PANTHER; PTHR12131; ATP-DEPENDENT RNA AND DNA HELICASE; 1.
DR PANTHER; PTHR12131:SF8; HELICASE SKI2W; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF08148; DSHCT; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF21408; MTR4-like_stalk; 1.
DR Pfam; PF13234; MTR4_beta-barrel; 1.
DR Pfam; PF17911; Ski2_N; 1.
DR PIRSF; PIRSF005198; Antiviral_helicase_SKI2; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM01142; DSHCT; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000264840};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 323..479
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 594..759
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 137..157
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 230..283
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 230..248
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 265..283
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1242 AA; 138813 MW; 5F8B18E287E03DDA CRC64;
MDRLNVPPPG PMDLPMSLLE MGCSGRFELI THPVPGQSLP PHSTLPHGLP PTNLNLETEV
EKQFLRDPAW LPIHDKDFAF QKFLKVTQRK VDVDSLLNCC PSPLHSGLSV VRDPTTGMLL
DFTEVLLENT GLSAKNSLSL QRQPGPPSES LRGSNTNYPF LPGGMEELTL EQIKKKSELE
EEIDFESALL KVAPGLKAGM DFTDKDAKIA KPEVNLMSLL STVEGISGLQ LEEKEKDKES
EDAPKLPRTN SLEDLGIKDA ASSSSPPEKG KEEKSKLKEN TEENKKWAIP VNITSPCDDF
HKRIPNPAFK WPFELDVFQK QAVLRLEAHD SVFVAAHTSA GKTVVAEYAI ALSQKHMTRT
IYTSPIKALS NQKFRDFKNT FGDVGLLTGD VQLSPESSCL IMTTEILRSM LYNGSEVIRD
LEWVIFDEVH YINDAERGVV WEEVLIMLPD HVSIILLSAT VPNALEFSEW IGRIKKRHIY
VISTLKRPVP LEHYLYTGNS TKTQKEMFLL VDATGNFLTK GYYAAVDAKK ERTSKHAQSF
GTKNTSQNTT ASQDRSVWLT LLHFLSQRQQ TPVVAFTFSR TRCDENARSL DSMDLTTSIE
KAEIHSFFQK SLTRLRGADR QLPQILLMRD LLKRGIAVHH SGILPILKEV IEMLFSRGLV
KVLFATETFA MGVNMPARTV VFDSIRKHDG TGFRNLLPGE YIQMAGRAGR RGLDATGTVI
ILCKAGVHEM ADLHVMMLGK PTLLQSQFRL TYTMILNLLR VEALRVTDMM RRSFSESHRD
TQTHEKRISQ LKQMLSAVPS VDTEGQLSDL LPYYHTVTEL KKTTEAVQHA ILESVNGLKA
LSVGRVIVVN NKQHLNALGV ILQVSSASVN RTFTALIICE KGNEEGKGND NAALPHLHNT
SLFIPEGPCS HTVQKLKLQD ISAITVKTLK VIPERIIDNY NKRQQPRFKL DPPGQAISTA
TQELLRLAEA NPGGIATLDP VNDLQLKSVD VVEANMRLRV LQDSLRDFNC IHSPMFAEQF
ARIKERMSLQ EELDQLLFLV SDQSLTLLPE YHQRIKVLQS LQYIDSGGAV QLKGRVACQI
SSHELLLTEL LFENVLSPLA PEESAALLSC LVFTQNTQVE PHITNTLQEG IEQVKSVAQR
IGELQRECGI PQTAEEFVGQ FKFGLTEVVY CWARGMPFAE IAQLTDVQEG TVVRCIQRLD
EVLKEVRQAA RIVGDSVLGS KMEKASLAIR RDIVFTASLY TH
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