ID A0A3Q7FLW4_SOLLC Unreviewed; 232 AA.
AC A0A3Q7FLW4;
DT 10-APR-2019, integrated into UniProtKB/TrEMBL.
DT 10-APR-2019, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=DUF4220 domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum;
OC Solanum subgen. Lycopersicon.
OX NCBI_TaxID=4081 {ECO:0000313|EnsemblPlants:Solyc03g077925.1.1};
RN [1] {ECO:0000313|EnsemblPlants:Solyc03g077925.1.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Heinz 1706 {ECO:0000313|EnsemblPlants:Solyc03g077925.1.1};
RX PubMed=22660326; DOI=10.1038/nature11119;
RG Tomato Genome Consortium;
RT "The tomato genome sequence provides insights into fleshy fruit
RT evolution.";
RL Nature 485:635-641(2012).
RN [2] {ECO:0000313|EnsemblPlants:Solyc03g077925.1.1}
RP IDENTIFICATION.
RC STRAIN=cv. Heinz 1706 {ECO:0000313|EnsemblPlants:Solyc03g077925.1.1};
RG EnsemblPlants;
RL Submitted (JAN-2019) to UniProtKB.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS4 family.
CC {ECO:0000256|ARBA:ARBA00007465}.
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DR AlphaFoldDB; A0A3Q7FLW4; -.
DR STRING; 4081.A0A3Q7FLW4; -.
DR PaxDb; 4081-Solyc03g077930-2-1; -.
DR EnsemblPlants; Solyc03g077925.1.1; Solyc03g077925.1.1; Solyc03g077925.1.
DR Gramene; Solyc03g077925.1.1; Solyc03g077925.1.1; Solyc03g077925.1.
DR InParanoid; A0A3Q7FLW4; -.
DR Proteomes; UP000004994; Chromosome 3.
DR GO; GO:0022627; C:cytosolic small ribosomal subunit; IBA:GO_Central.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0042274; P:ribosomal small subunit biogenesis; IBA:GO_Central.
DR Gene3D; 3.40.50.150; Vaccinia Virus protein VP39; 1.
DR InterPro; IPR022801; Ribosomal_uS4.
DR InterPro; IPR018079; Ribosomal_uS4_CS.
DR InterPro; IPR029063; SAM-dependent_MTases_sf.
DR PANTHER; PTHR11831; 30S 40S RIBOSOMAL PROTEIN; 1.
DR PANTHER; PTHR11831:SF47; 40S RIBOSOMAL PROTEIN S9-2; 1.
DR SUPFAM; SSF55174; Alpha-L RNA-binding motif; 1.
DR SUPFAM; SSF53335; S-adenosyl-L-methionine-dependent methyltransferases; 1.
DR PROSITE; PS00632; RIBOSOMAL_S4; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000004994};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 41..58
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 105..131
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
SQ SEQUENCE 232 AA; 27236 MW; A33D4A4D41E184BA CRC64;
MSILSKISQY TGITLSEQQP EYCLWKKKVS MLLRLIKYDR IILVYVTIVL IIIFSEVLEH
IGHDFIRKFI SCFEFTLADD GFLVFQVMNI FNAKRIQSSD FMKEYIFLVS SLTALSRVTS
VMTSAYMFFL YNCKKTLKKL QRPYEKEQFD AKLKLVGEYG LSCKRELLTL DEKDPRRILK
VLALNVENFL ECRLETLMFK TYMVKSIHHA RVLISEFSLT SPFGDGRPKR VK
//