ID A0A3Q7FQY6_SOLLC Unreviewed; 385 AA.
AC A0A3Q7FQY6;
DT 10-APR-2019, integrated into UniProtKB/TrEMBL.
DT 10-APR-2019, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE RecName: Full=E2F/DP family winged-helix DNA-binding domain-containing protein {ECO:0000259|SMART:SM01372};
GN Name=101259523 {ECO:0000313|EnsemblPlants:Solyc03g113760.3.1};
OS Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum;
OC Solanum subgen. Lycopersicon.
OX NCBI_TaxID=4081 {ECO:0000313|EnsemblPlants:Solyc03g113760.3.1};
RN [1] {ECO:0000313|EnsemblPlants:Solyc03g113760.3.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Heinz 1706 {ECO:0000313|EnsemblPlants:Solyc03g113760.3.1};
RX PubMed=22660326; DOI=10.1038/nature11119;
RG Tomato Genome Consortium;
RT "The tomato genome sequence provides insights into fleshy fruit
RT evolution.";
RL Nature 485:635-641(2012).
RN [2] {ECO:0000313|EnsemblPlants:Solyc03g113760.3.1}
RP IDENTIFICATION.
RC STRAIN=cv. Heinz 1706 {ECO:0000313|EnsemblPlants:Solyc03g113760.3.1};
RG EnsemblPlants;
RL Submitted (JAN-2019) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU003796}.
CC -!- SIMILARITY: Belongs to the E2F/DP family.
CC {ECO:0000256|ARBA:ARBA00010940, ECO:0000256|RuleBase:RU003796}.
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DR RefSeq; XP_004236152.1; XM_004236104.3.
DR AlphaFoldDB; A0A3Q7FQY6; -.
DR SMR; A0A3Q7FQY6; -.
DR STRING; 4081.A0A3Q7FQY6; -.
DR PaxDb; 4081-Solyc03g113760-2-1; -.
DR EnsemblPlants; Solyc03g113760.3.1; Solyc03g113760.3.1; Solyc03g113760.3.
DR GeneID; 101259523; -.
DR Gramene; Solyc03g113760.3.1; Solyc03g113760.3.1; Solyc03g113760.3.
DR KEGG; sly:101259523; -.
DR InParanoid; A0A3Q7FQY6; -.
DR OMA; RMKRVHD; -.
DR OrthoDB; 1761at2759; -.
DR Proteomes; UP000004994; Chromosome 3.
DR GO; GO:0090575; C:RNA polymerase II transcription regulator complex; IBA:GO_Central.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0009058; P:biosynthetic process; IEA:UniProt.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR InterPro; IPR015633; E2F.
DR InterPro; IPR003316; E2F_WHTH_DNA-bd_dom.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR12081; TRANSCRIPTION FACTOR E2F; 1.
DR PANTHER; PTHR12081:SF7; TRANSCRIPTION FACTOR EFL-3; 1.
DR Pfam; PF02319; E2F_TDP; 2.
DR SMART; SM01372; E2F_TDP; 2.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 2.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|RuleBase:RU003796};
KW Nucleus {ECO:0000256|RuleBase:RU003796};
KW Reference proteome {ECO:0000313|Proteomes:UP000004994};
KW Transcription {ECO:0000256|ARBA:ARBA00023163,
KW ECO:0000256|RuleBase:RU003796};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015,
KW ECO:0000256|RuleBase:RU003796}.
FT DOMAIN 17..82
FT /note="E2F/DP family winged-helix DNA-binding"
FT /evidence="ECO:0000259|SMART:SM01372"
FT DOMAIN 152..232
FT /note="E2F/DP family winged-helix DNA-binding"
FT /evidence="ECO:0000259|SMART:SM01372"
FT REGION 101..149
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 128..146
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 385 AA; 43270 MW; 1C8FAD52579B2E56 CRC64;
MALASDPSKE SRSTYCRKQK SLGLLCSNFL SLYDRQGVET IGLDDAARRL GVERRRIYDI
VNVLESIGVL ARKAKNRYSW KGLEAIPRTL EQLKEEGLKE NVSGFDGSSS AKGSDDDDDD
DRDSNLITSS QTDKLSSNSG VNSAAPVKSE NRREKSLGLL TQNFVKLFLC TNVDMICLDE
AAKILLGDGR PPAMTRTKVR RLYDIANVLS SMKYIEKTHH PETRKPAFRW LGLGGRSEYK
SVDAFCAIES KKRVFGTELT NTTIKRNRVA LPMDGISDEA TRKQLLTEVK CENLENAFHI
PKQEPGLTAS KKSYHFGPFA PPTVPQAEVS EADRMKRVHD WESLASSYRP QYHNQALKDL
FAHYVEAWKS WYLEVAGKNP IQLIS
//
