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Database: UniProt
Entry: A0A3Q7G3Z4_SOLLC
LinkDB: A0A3Q7G3Z4_SOLLC
Original site: A0A3Q7G3Z4_SOLLC 
ID   A0A3Q7G3Z4_SOLLC        Unreviewed;      1213 AA.
AC   A0A3Q7G3Z4;
DT   10-APR-2019, integrated into UniProtKB/TrEMBL.
DT   10-APR-2019, sequence version 1.
DT   24-JAN-2024, entry version 21.
DE   RecName: Full=MIF4G domain-containing protein {ECO:0000259|SMART:SM00543};
OS   Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum;
OC   Solanum subgen. Lycopersicon.
OX   NCBI_TaxID=4081 {ECO:0000313|EnsemblPlants:Solyc04g049770.3.1};
RN   [1] {ECO:0000313|EnsemblPlants:Solyc04g049770.3.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Heinz 1706 {ECO:0000313|EnsemblPlants:Solyc04g049770.3.1};
RX   PubMed=22660326; DOI=10.1038/nature11119;
RG   Tomato Genome Consortium;
RT   "The tomato genome sequence provides insights into fleshy fruit
RT   evolution.";
RL   Nature 485:635-641(2012).
RN   [2] {ECO:0000313|EnsemblPlants:Solyc04g049770.3.1}
RP   IDENTIFICATION.
RC   STRAIN=cv. Heinz 1706 {ECO:0000313|EnsemblPlants:Solyc04g049770.3.1};
RG   EnsemblPlants;
RL   Submitted (JAN-2019) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
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DR   AlphaFoldDB; A0A3Q7G3Z4; -.
DR   STRING; 4081.A0A3Q7G3Z4; -.
DR   PaxDb; 4081-Solyc04g049760-2-1; -.
DR   EnsemblPlants; Solyc04g049770.3.1; Solyc04g049770.3.1; Solyc04g049770.3.
DR   Gramene; Solyc04g049770.3.1; Solyc04g049770.3.1; Solyc04g049770.3.
DR   InParanoid; A0A3Q7G3Z4; -.
DR   OMA; DFQHHQI; -.
DR   Proteomes; UP000004994; Chromosome 4.
DR   GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR   GO; GO:0035145; C:exon-exon junction complex; IBA:GO_Central.
DR   GO; GO:0005844; C:polysome; IBA:GO_Central.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IBA:GO_Central.
DR   Gene3D; 1.25.40.180; -; 3.
DR   InterPro; IPR016024; ARM-type_fold.
DR   InterPro; IPR003890; MIF4G-like_typ-3.
DR   InterPro; IPR039762; Nmd2/UPF2.
DR   InterPro; IPR007193; Upf2/Nmd2_C.
DR   PANTHER; PTHR12839; NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2; 1.
DR   PANTHER; PTHR12839:SF7; REGULATOR OF NONSENSE TRANSCRIPTS 2; 1.
DR   Pfam; PF02854; MIF4G; 2.
DR   Pfam; PF04050; Upf2; 1.
DR   SMART; SM00543; MIF4G; 3.
DR   SUPFAM; SSF48371; ARM repeat; 3.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW   Reference proteome {ECO:0000313|Proteomes:UP000004994}.
FT   DOMAIN          62..284
FT                   /note="MIF4G"
FT                   /evidence="ECO:0000259|SMART:SM00543"
FT   DOMAIN          484..672
FT                   /note="MIF4G"
FT                   /evidence="ECO:0000259|SMART:SM00543"
FT   DOMAIN          687..903
FT                   /note="MIF4G"
FT                   /evidence="ECO:0000259|SMART:SM00543"
FT   REGION          1..28
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          317..350
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          389..408
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          415..477
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          928..1026
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1068..1119
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1158..1213
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          270..304
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        333..347
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        418..477
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        928..943
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        944..963
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        966..988
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        989..1016
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1078..1097
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1163..1181
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1213 AA;  138268 MW;  01FBBF74DB1418F5 CRC64;
     MEHPEDDCRV GVEHPEKHED EEAVARHEEF KKSVEAKIAL RQNNLNPERP DTGFLRTLDS
     SIKRNTAVIK KLKQINEEQR EGLMEELRSV NLSKFVSEAV TAICDAKLRA ADIQAAVLIC
     SLLHQRYKDF SPSLVQGLVK IFFPGKAAED VDVDRNARAM KKRSTLKLLL ELYFVGVVDD
     TGIFVNIVKD LTSVEHLKDR DATQTNLSLL ASFARQGRYL LGLQLAGQDI LEELFKALNV
     TTDQKRFFRK VFQTYYDASV ELLQSEHASL RQMEHENEKI LSAKGELNEE NASAYEKLRK
     AYDQLYRGIS GLAEALDLQP PVMPEDGHTT RVTSGEDASS PGGSKDSSSL EALWDDEDTR
     AFYECLPDLR AFVPAVLLGE AEPKLSEQLA KVQDHSIDST PDADETQTAA QEIADAVAVQ
     EDRNDIGKDK DEKDKEKTKE KSKEKDKDEK DKEPDKEKTR EKEAERKGEG DKEKAKGVEG
     TNLDSLLQRL PGCVSRDLID QLTVEFCYLN SKSSRKKLVR ALFNVPRTSL ELLPYYSRMV
     ATLSTCMKDV SSMLLQLLEE EFNFLINKKD QMNIETKIRN IRFIGELCKF RIAPPGLVFS
     CLKACLDDFS HHNIDVACNL LETCGRFLYR SPETTIRMAN MLEILMRLKN VKNLDPRHIT
     LVENAYYLCK PPERSARVSK VRPPLHQYIR KLLFSDLDKS SLEHVLRQLR KLPWSECEAY
     LLKCFMKVHR GKYGQIHLIA SLTACLSRYH DDFSVAVVDE VYKYLSLTTI FLRRIVLEEI
     RVGLELNDYG MQQRRIAHMR FLGELYNYEL VDSSVIFDTL YLILVFGHGT SEQDVLDPPE
     DCFRIRMVIT LLETCGHYFD RGSSKRKLDR FLIHFQRYIL NKGVLPLDIE FDLQDLFAEL
     RPNMTRYASI EEVNAALVDL EEHERIVTSE KANNEKHSET EKIPSRTTSG MSVNGQSLSN
     GIEENGLHEE VVETESDSEN GTIEHVAHDD DEETDDWNRD DRCDTEDESD EGDGPGSDEE
     DKVHVRSKVA EVDPLEEAEF ERELRALMQE SLDSRKLELR GRPTLNMTIP MNVFEGPTKD
     HRGVEGESGD ETLDEATGGS KEVPVKVLVK RGNKQQTKKM LIPRDCSLIQ STKQKEAAEL
     EEKQDIKRLV LEYNDREEEE LNGLGNQPSS WTQSSGSRVA HRGSTWDAPG RGSGSRHRYL
     HHSGGGLYYG RRR
//
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