ID A0A3Q7HS99_SOLLC Unreviewed; 492 AA.
AC A0A3Q7HS99;
DT 10-APR-2019, integrated into UniProtKB/TrEMBL.
DT 10-APR-2019, sequence version 1.
DT 24-JAN-2024, entry version 22.
DE RecName: Full=Zinc finger CCCH domain-containing protein 18 {ECO:0008006|Google:ProtNLM};
OS Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum;
OC Solanum subgen. Lycopersicon.
OX NCBI_TaxID=4081 {ECO:0000313|EnsemblPlants:Solyc08g068820.3.1};
RN [1] {ECO:0000313|EnsemblPlants:Solyc08g068820.3.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Heinz 1706 {ECO:0000313|EnsemblPlants:Solyc08g068820.3.1};
RX PubMed=22660326; DOI=10.1038/nature11119;
RG Tomato Genome Consortium;
RT "The tomato genome sequence provides insights into fleshy fruit
RT evolution.";
RL Nature 485:635-641(2012).
RN [2] {ECO:0000313|EnsemblPlants:Solyc08g068820.3.1}
RP IDENTIFICATION.
RC STRAIN=cv. Heinz 1706 {ECO:0000313|EnsemblPlants:Solyc08g068820.3.1};
RG EnsemblPlants;
RL Submitted (JAN-2019) to UniProtKB.
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DR RefSeq; XP_004245289.1; XM_004245241.3.
DR AlphaFoldDB; A0A3Q7HS99; -.
DR STRING; 4081.A0A3Q7HS99; -.
DR PaxDb; 4081-Solyc08g068830-2-1; -.
DR EnsemblPlants; Solyc08g068820.3.1; Solyc08g068820.3.1; Solyc08g068820.3.
DR GeneID; 101268301; -.
DR Gramene; Solyc08g068820.3.1; Solyc08g068820.3.1; Solyc08g068820.3.
DR KEGG; sly:101268301; -.
DR InParanoid; A0A3Q7HS99; -.
DR OMA; QYTRGIG; -.
DR OrthoDB; 3060898at2759; -.
DR Proteomes; UP000004994; Chromosome 8.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 2.30.30.1190; -; 1.
DR InterPro; IPR000467; G_patch_dom.
DR InterPro; IPR041367; Znf-CCCH_4.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR47650; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 22; 1.
DR PANTHER; PTHR47650:SF2; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 22; 1.
DR Pfam; PF01585; G-patch; 1.
DR Pfam; PF18044; zf-CCCH_4; 1.
DR SMART; SM00443; G_patch; 1.
DR SMART; SM00356; ZnF_C3H1; 1.
DR PROSITE; PS50174; G_PATCH; 1.
DR PROSITE; PS50103; ZF_C3H1; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00723};
KW Reference proteome {ECO:0000313|Proteomes:UP000004994};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00723}.
FT DOMAIN 142..169
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 296..342
FT /note="G-patch"
FT /evidence="ECO:0000259|PROSITE:PS50174"
FT ZN_FING 142..169
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 239..268
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 339..380
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 393..418
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 470..492
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 241..265
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 352..366
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 492 AA; 55036 MW; 2BC47C124870B7F9 CRC64;
MADEEDRALE EQLEIQLDEQ KDALHSLTEA LSSDPSDPEL LSVHEELVQS IKDSEEGLLH
LKRARLLLEV DASLHGFKEQ PADVEVEPLD PTENEEEPLV DEEYAVGSKC RFRNNDGRWY
NGLIVGLEGS HFAKVCFRTP TSENMVMCQF FLQQRCRFGS SCRLSHGIDI PISSLKKYIP
IKWDSSLAGS CIWARSDSKA GLWKKAELGS WDEKLNLGHI VFCDDGSSTM LGAENIELSE
HAEVSDEEES YSSSEENDSS DYEDDSPEGL GFVGSTALQC GVQNETTLFA KWENHTRGIA
SKMMANMGYR EGMGLGSSGQ GMVNPIPVKV LPPKQSLDHA IKGEHEDKEH KKRSRGGKRK
RERKFAAAAR AAKEAEESRP DVFSLINTQL AVHEETMNNS SGNRRPSKAK GGEKKEDRRA
LVAYDDEIKG LKIQAQKLEE MVQRNRNEKP VYDAAMRKLN ETRKAIATAE AAHASASNAV
HSKEKEKRWL KF
//