ID A0A3Q7IYL8_SOLLC Unreviewed; 138 AA.
AC A0A3Q7IYL8;
DT 10-APR-2019, integrated into UniProtKB/TrEMBL.
DT 10-APR-2019, sequence version 1.
DT 27-MAR-2024, entry version 16.
DE RecName: Full=BED-type domain-containing protein {ECO:0000259|PROSITE:PS50808};
OS Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum;
OC Solanum subgen. Lycopersicon.
OX NCBI_TaxID=4081 {ECO:0000313|EnsemblPlants:Solyc11g065845.1.1};
RN [1] {ECO:0000313|EnsemblPlants:Solyc11g065845.1.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Heinz 1706 {ECO:0000313|EnsemblPlants:Solyc11g065845.1.1};
RX PubMed=22660326; DOI=10.1038/nature11119;
RG Tomato Genome Consortium;
RT "The tomato genome sequence provides insights into fleshy fruit
RT evolution.";
RL Nature 485:635-641(2012).
RN [2] {ECO:0000313|EnsemblPlants:Solyc11g065845.1.1}
RP IDENTIFICATION.
RC STRAIN=cv. Heinz 1706 {ECO:0000313|EnsemblPlants:Solyc11g065845.1.1};
RG EnsemblPlants;
RL Submitted (JAN-2019) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR AlphaFoldDB; A0A3Q7IYL8; -.
DR STRING; 4081.A0A3Q7IYL8; -.
DR EnsemblPlants; Solyc11g065845.1.1; Solyc11g065845.1.1; Solyc11g065845.1.
DR Gramene; Solyc11g065845.1.1; Solyc11g065845.1.1; Solyc11g065845.1.
DR InParanoid; A0A3Q7IYL8; -.
DR Proteomes; UP000004994; Chromosome 11.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR InterPro; IPR045259; DAYSLEEPER-like.
DR InterPro; IPR008906; HATC_C_dom.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR003656; Znf_BED.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR PANTHER; PTHR23272; BED FINGER-RELATED; 1.
DR PANTHER; PTHR23272:SF123; HAT FAMILY DIMERISATION DOMAIN CONTAINING PROTEIN, EXPRESSED; 1.
DR Pfam; PF05699; Dimer_Tnp_hAT; 1.
DR Pfam; PF02892; zf-BED; 1.
DR SMART; SM00614; ZnF_BED; 1.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50808; ZF_BED; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000004994};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00027}.
FT DOMAIN 80..138
FT /note="BED-type"
FT /evidence="ECO:0000259|PROSITE:PS50808"
SQ SEQUENCE 138 AA; 15783 MW; E48E132145FD66A8 CRC64;
MARDVLSIPV SSVASECAFS TGGCIFDSFR SSLTLKLVEA LVCLQDWLRS EPQPISIEED
LDFLEQLEED FIMPQLHGSN ARSPIWNHYE KLEEKEDGSW TVKCIHCGRV ANYHSHYNGT
ASLRNHVKRC LETRNQNR
//