ID A0A3Q9UN12_9ACTN Unreviewed; 114 AA.
AC A0A3Q9UN12;
DT 10-APR-2019, integrated into UniProtKB/TrEMBL.
DT 10-APR-2019, sequence version 1.
DT 24-JAN-2024, entry version 22.
DE RecName: Full=DNA-directed RNA polymerase subunit omega {ECO:0000256|ARBA:ARBA00013725, ECO:0000256|HAMAP-Rule:MF_00366};
DE Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};
DE EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418, ECO:0000256|HAMAP-Rule:MF_00366};
DE AltName: Full=RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};
DE AltName: Full=Transcriptase subunit omega {ECO:0000256|ARBA:ARBA00029924, ECO:0000256|HAMAP-Rule:MF_00366};
GN Name=rpoZ {ECO:0000256|HAMAP-Rule:MF_00366};
GN ORFNames=C0Z10_06540 {ECO:0000313|EMBL:AZZ39463.1}, C0Z11_07360
GN {ECO:0000313|EMBL:AZZ42124.1}, NCTC13652_00283
GN {ECO:0000313|EMBL:VEI02117.1};
OS Acidipropionibacterium jensenii.
OC Bacteria; Actinomycetota; Actinomycetes; Propionibacteriales;
OC Propionibacteriaceae; Acidipropionibacterium.
OX NCBI_TaxID=1749 {ECO:0000313|EMBL:AZZ42124.1, ECO:0000313|Proteomes:UP000285429};
RN [1] {ECO:0000313|Proteomes:UP000285429, ECO:0000313|Proteomes:UP000285875}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JS279 {ECO:0000313|Proteomes:UP000285429}, and JS280
RC {ECO:0000313|Proteomes:UP000285875};
RA Deptula P., Laine P., Smolander O.-P., Paulin L., Auvinen P., Varmanen P.;
RT "Whole genome sequencing of Acidipropionibacterium jensenii strains JS279
RT and JS280.";
RL Submitted (DEC-2017) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:VEI02117.1, ECO:0000313|Proteomes:UP000277858}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NCTC13652 {ECO:0000313|EMBL:VEI02117.1,
RC ECO:0000313|Proteomes:UP000277858};
RG Pathogen Informatics;
RL Submitted (DEC-2018) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:AZZ42124.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=JS279 {ECO:0000313|EMBL:AZZ42124.1}, and JS280
RC {ECO:0000313|EMBL:AZZ39463.1};
RX PubMed=31671651;
RA Deptula P., Loivamaa I., Smolander O.P., Laine P., Roberts R.J.,
RA Piironen V., Paulin L., Savijoki K., Auvinen P., Varmanen P.;
RT "Red-Brown Pigmentation of Acidipropionibacterium jensenii Is Tied to
RT Haemolytic Activity and cyl-Like Gene Cluster.";
RL Microorganisms 7:0-E512(2019).
CC -!- FUNCTION: Promotes RNA polymerase assembly. Latches the N- and C-
CC terminal regions of the beta' subunit thereby facilitating its
CC interaction with the beta and alpha subunits. {ECO:0000256|HAMAP-
CC Rule:MF_00366}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000256|ARBA:ARBA00024550,
CC ECO:0000256|HAMAP-Rule:MF_00366};
CC -!- SUBUNIT: The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta'
CC and 1 omega subunit. When a sigma factor is associated with the core
CC the holoenzyme is formed, which can initiate transcription.
CC {ECO:0000256|ARBA:ARBA00025935, ECO:0000256|HAMAP-Rule:MF_00366}.
CC -!- SIMILARITY: Belongs to the RNA polymerase subunit omega family.
CC {ECO:0000256|ARBA:ARBA00006711, ECO:0000256|HAMAP-Rule:MF_00366}.
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DR EMBL; CP025570; AZZ39463.1; -; Genomic_DNA.
DR EMBL; CP025571; AZZ42124.1; -; Genomic_DNA.
DR EMBL; LR134473; VEI02117.1; -; Genomic_DNA.
DR RefSeq; WP_028702514.1; NZ_LR134473.1.
DR AlphaFoldDB; A0A3Q9UN12; -.
DR STRING; 1122997.GCA_000425285_00750; -.
DR KEGG; aji:C0Z10_06540; -.
DR OrthoDB; 8481372at2; -.
DR Proteomes; UP000277858; Chromosome 1.
DR Proteomes; UP000285429; Chromosome.
DR Proteomes; UP000285875; Chromosome.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:UniProtKB-UniRule.
DR Gene3D; 3.90.940.10; -; 1.
DR HAMAP; MF_00366; RNApol_bact_RpoZ; 1.
DR InterPro; IPR003716; DNA-dir_RNA_pol_omega.
DR InterPro; IPR006110; Pol_omega/Rpo6/RPB6.
DR InterPro; IPR036161; RPB6/omega-like_sf.
DR NCBIfam; TIGR00690; rpoZ; 1.
DR PANTHER; PTHR34476; DNA-DIRECTED RNA POLYMERASE SUBUNIT OMEGA; 1.
DR PANTHER; PTHR34476:SF1; DNA-DIRECTED RNA POLYMERASE SUBUNIT OMEGA; 1.
DR Pfam; PF01192; RNA_pol_Rpb6; 1.
DR SMART; SM01409; RNA_pol_Rpb6; 1.
DR SUPFAM; SSF63562; RPB6/omega subunit-like; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000256|HAMAP-Rule:MF_00366};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695, ECO:0000256|HAMAP-
KW Rule:MF_00366}; Reference proteome {ECO:0000313|Proteomes:UP000277858};
KW Transcription {ECO:0000256|ARBA:ARBA00023163, ECO:0000256|HAMAP-
KW Rule:MF_00366};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|HAMAP-
KW Rule:MF_00366}.
FT REGION 88..114
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 114 AA; 12340 MW; 06E34E2735D58D1C CRC64;
MSETIPEGIV NPPIDQLLEH VDSKYRLVLF AAKRARQINA YYSQLAEGLL ENVGPLVEVA
NQEKPLSIAL REIQAGVIEA HQMNPEEVAA EAAAAQQAPA VELDDPFADL TPPA
//
