ID   A0A3R7P7S4_PENVA        Unreviewed;       795 AA.
AC   A0A3R7P7S4;
DT   10-APR-2019, integrated into UniProtKB/TrEMBL.
DT   10-APR-2019, sequence version 1.
DT   27-MAR-2024, entry version 13.
DE   RecName: Full=Gypsy retrotransposon integrase-like protein 1 {ECO:0000256|ARBA:ARBA00039658};
GN   ORFNames=C7M84_018820 {ECO:0000313|EMBL:ROT63311.1};
OS   Penaeus vannamei (Whiteleg shrimp) (Litopenaeus vannamei).
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea;
OC   Malacostraca; Eumalacostraca; Eucarida; Decapoda; Dendrobranchiata;
OC   Penaeoidea; Penaeidae; Penaeus.
OX   NCBI_TaxID=6689 {ECO:0000313|EMBL:ROT63311.1, ECO:0000313|Proteomes:UP000283509};
RN   [1] {ECO:0000313|EMBL:ROT63311.1, ECO:0000313|Proteomes:UP000283509}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   TISSUE=Muscle {ECO:0000313|EMBL:ROT63311.1};
RA   Zhang X., Yuan J., Li F., Xiang J.;
RL   Submitted (APR-2018) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ROT63311.1, ECO:0000313|Proteomes:UP000283509}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   TISSUE=Muscle {ECO:0000313|EMBL:ROT63311.1};
RA   Sun Y., Gao Y., Yu Y.;
RT   "The decoding of complex shrimp genome reveals the adaptation for benthos
RT   swimmer, frequently molting mechanism and breeding impact on genome.";
RL   Submitted (JAN-2019) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:ROT63311.1}.
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DR   EMBL; QCYY01003452; ROT63311.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A3R7P7S4; -.
DR   Proteomes; UP000283509; Unassembled WGS sequence.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 2.
DR   Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR001878; Znf_CCHC.
DR   InterPro; IPR036875; Znf_CCHC_sf.
DR   PANTHER; PTHR47266; ENDONUCLEASE-RELATED; 1.
DR   PANTHER; PTHR47266:SF28; GYPSY RETROTRANSPOSON INTEGRASE-LIKE PROTEIN 1; 1.
DR   Pfam; PF00098; zf-CCHC; 1.
DR   SMART; SM00343; ZnF_C2HC; 1.
DR   SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
DR   PROSITE; PS50158; ZF_CCHC; 1.
PE   4: Predicted;
KW   Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW   Reference proteome {ECO:0000313|Proteomes:UP000283509};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT   DOMAIN          271..287
FT                   /note="CCHC-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50158"
FT   DOMAIN          602..699
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
FT   REGION          1..46
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..39
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   795 AA;  88599 MW;  5F523F9772467442 CRC64;
     MGRRNGGSRN NSPSRPSTSQ EAASAPSVGR NSPSGQTLLP DSDDRGIERL PEISFKAEVS
     SAHPLKRNQE VESWLRSVEN HTRPQTDAAF IKAAKASCKG AAELIVNSPL FDSIVSWVEF
     KDKLRQKFRG TGTSSDFYRV LHSQKLQAGQ APMDFYLTLE GMVYQGLRDY PRAIGDPDDL
     IRRVFLQGLP RWIREAVVVK EEAELCNLVE TTQRVWSLRE SEGPGVSSPT RSPFRPRVLA
     AAEVDPPRKY CRYHKNHEHD SSECRVLSER RKCFACGEQG HFARQCPFVS RQVGRGSDTV
     TGEQRSQPLI AITRFFRNLQ VDLVSLMVNG FKTQCFVDTG SEVAHVAVPA FVPPRSGRFV
     KCSVPRGMQA AKELMVSGIE CPLVVPRSLQ EYAAEEQALG TELFMGNDND FELGEGFIDD
     DFDSFDAVGD FGGADDYILL PDVDLPPCSV VTQTPVGVDQ SGSSTDCPED VQLKDAELGD
     LLSEIDLGHL TLEQQQQLRQ LSRAVAATEL HNRDPDDLRR HQLEDPLWKE VIEYLEERNL
     PRRRLPLTLE EFELRDGVLY HVRHLPDRVL HQLVVPKTLR GSAMHLAHSS ATAGHLGSTG
     HIASYPLERV SADLMELEVT SQGNRYVLAF IDQLTRYVQL IPLPSKDAET VADAFINQFV
     TVFGPPPNGM IERTNRVVKN ALATLLEASP LEWDELLPYV RLAMNSAVHR SAREGWARDY
     NRRTRKSTFA AEVGDLVLFK DLPRMAGAGR RGALGPRWFG PARICKKTGP VTRRLPEDDP
     AVALLASFCR PPDHG
//