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Database: UniProt
Entry: A0A3R8VM64_9PSED
LinkDB: A0A3R8VM64_9PSED
Original site: A0A3R8VM64_9PSED 
ID   A0A3R8VM64_9PSED        Unreviewed;       853 AA.
AC   A0A3R8VM64;
DT   10-APR-2019, integrated into UniProtKB/TrEMBL.
DT   10-APR-2019, sequence version 1.
DT   24-JAN-2024, entry version 24.
DE   SubName: Full=Nitrite reductase large subunit {ECO:0000313|EMBL:RRV04545.1};
GN   ORFNames=EGJ27_22185 {ECO:0000313|EMBL:RRV04545.1};
OS   Pseudomonas sp. v388.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=2479849 {ECO:0000313|EMBL:RRV04545.1, ECO:0000313|Proteomes:UP000268166};
RN   [1] {ECO:0000313|EMBL:RRV04545.1, ECO:0000313|Proteomes:UP000268166}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=v388 {ECO:0000313|Proteomes:UP000268166};
RA   D'Souza A.W., Potter R.F., Wallace M., Shupe A., Patel S., Sun S., Gul D.,
RA   Kwon J.H., Andleeb S., Burnham C.-A.D., Dantas G.;
RT   "Transmission dynamics of multidrug resistant bacteria on intensive care
RT   unit surfaces.";
RL   Submitted (OCT-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- COFACTOR:
CC       Name=FAD; Xref=ChEBI:CHEBI:57692;
CC         Evidence={ECO:0000256|ARBA:ARBA00001974,
CC         ECO:0000256|PIRNR:PIRNR037149};
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:RRV04545.1}.
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DR   EMBL; RHQN01000010; RRV04545.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A3R8VM64; -.
DR   OrthoDB; 9768666at2; -.
DR   UniPathway; UPA00653; -.
DR   Proteomes; UP000268166; Unassembled WGS sequence.
DR   GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR   GO; GO:0050660; F:flavin adenine dinucleotide binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0020037; F:heme binding; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0050661; F:NADP binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0008942; F:nitrite reductase [NAD(P)H] activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0042128; P:nitrate assimilation; IEA:UniProtKB-UniRule.
DR   CDD; cd19943; NirB_Fer2_BFD-like_1; 1.
DR   CDD; cd19944; NirB_Fer2_BFD-like_2; 1.
DR   Gene3D; 3.30.390.30; -; 1.
DR   Gene3D; 1.10.10.1100; BFD-like [2Fe-2S]-binding domain; 1.
DR   Gene3D; 3.50.50.60; FAD/NAD(P)-binding domain; 2.
DR   Gene3D; 3.30.413.10; Sulfite Reductase Hemoprotein, domain 1; 1.
DR   InterPro; IPR007419; BFD-like_2Fe2S-bd_dom.
DR   InterPro; IPR041854; BFD-like_2Fe2S-bd_dom_sf.
DR   InterPro; IPR036188; FAD/NAD-bd_sf.
DR   InterPro; IPR023753; FAD/NAD-binding_dom.
DR   InterPro; IPR016156; FAD/NAD-linked_Rdtase_dimer_sf.
DR   InterPro; IPR005117; NiRdtase/SiRdtase_haem-b_fer.
DR   InterPro; IPR036136; Nit/Sulf_reduc_fer-like_dom_sf.
DR   InterPro; IPR012744; Nitri_red_NirB.
DR   InterPro; IPR017121; Nitrite_Rdtase_lsu.
DR   InterPro; IPR006067; NO2/SO3_Rdtase_4Fe4S_dom.
DR   InterPro; IPR045854; NO2/SO3_Rdtase_4Fe4S_sf.
DR   InterPro; IPR006066; NO2/SO3_Rdtase_FeS/sirohaem_BS.
DR   InterPro; IPR041575; Rubredoxin_C.
DR   NCBIfam; TIGR02374; nitri_red_nirB; 1.
DR   PANTHER; PTHR43809; NITRITE REDUCTASE (NADH) LARGE SUBUNIT; 1.
DR   PANTHER; PTHR43809:SF1; NITRITE REDUCTASE (NADH) LARGE SUBUNIT; 1.
DR   Pfam; PF04324; Fer2_BFD; 1.
DR   Pfam; PF01077; NIR_SIR; 1.
DR   Pfam; PF03460; NIR_SIR_ferr; 1.
DR   Pfam; PF07992; Pyr_redox_2; 1.
DR   Pfam; PF18267; Rubredoxin_C; 1.
DR   PIRSF; PIRSF037149; NirB; 1.
DR   PRINTS; PR00368; FADPNR.
DR   PRINTS; PR00411; PNDRDTASEI.
DR   PRINTS; PR00397; SIROHAEM.
DR   SUPFAM; SSF51905; FAD/NAD(P)-binding domain; 2.
DR   SUPFAM; SSF56014; Nitrite and sulphite reductase 4Fe-4S domain-like; 1.
DR   SUPFAM; SSF55124; Nitrite/Sulfite reductase N-terminal domain-like; 1.
DR   PROSITE; PS00365; NIR_SIR; 1.
PE   4: Predicted;
KW   FAD {ECO:0000256|ARBA:ARBA00022827, ECO:0000256|PIRNR:PIRNR037149};
KW   Flavoprotein {ECO:0000256|ARBA:ARBA00022630,
KW   ECO:0000256|PIRNR:PIRNR037149}; Heme {ECO:0000256|ARBA:ARBA00022617};
KW   Iron {ECO:0000256|ARBA:ARBA00022617};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022617};
KW   Nitrate assimilation {ECO:0000256|ARBA:ARBA00023063,
KW   ECO:0000256|PIRNR:PIRNR037149};
KW   Oxidoreductase {ECO:0000256|ARBA:ARBA00023002};
KW   Reference proteome {ECO:0000313|Proteomes:UP000268166}.
FT   DOMAIN          13..293
FT                   /note="FAD/NAD(P)-binding"
FT                   /evidence="ECO:0000259|Pfam:PF07992"
FT   DOMAIN          327..395
FT                   /note="NADH-rubredoxin oxidoreductase C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF18267"
FT   DOMAIN          428..476
FT                   /note="BFD-like [2Fe-2S]-binding"
FT                   /evidence="ECO:0000259|Pfam:PF04324"
FT   DOMAIN          566..628
FT                   /note="Nitrite/Sulfite reductase ferredoxin-like"
FT                   /evidence="ECO:0000259|Pfam:PF03460"
FT   DOMAIN          638..759
FT                   /note="Nitrite/sulphite reductase 4Fe-4S"
FT                   /evidence="ECO:0000259|Pfam:PF01077"
SQ   SEQUENCE   853 AA;  92544 MW;  8E7EFB70DD5D1070 CRC64;
     MNTTVFPQSD VKTLIVVGNG MVGHHCVEQL IAGGALAHYR IHVFGEEAQR AYDRVHLSEY
     FTGRDAESLA MSDMALYEQA GLTLHLGVPV LEIDRERREI ITAQGCFGYD KLVLATGSYP
     FVPPIEGAQG NSRLVYRTLQ DLDNIRYAAG NARRGVVVGG GLLGLEAANA LKSLGLEAHV
     VEFAPRLMPV QLDDLGGAAL KARIEALGVG VHLSRATQSI SDGKQYRYRM NFANDEFLET
     DLIVFSAGIR PQDALARQCA LELGPRGGIA IDEHCLTSDA DIYAIGECAA WNGSVFGLVA
     PGYQMARGVA AQLCGQDAQP FFGADMSTKL KLLGVDVGSI GDAHGALAGA VSYRYIDEAT
     SSYRRLVVSA DGKQVLGAVL VGDNSYYDTL LQYAQNGIAL PADPSSLILP HSEGAPTLGT
     DALPATATIC SCHNVSKGSI CAAIDDGCTD LAGIKACTKA ATGCGGCSAL LKQVFEHELI
     ARGVSVDKSL CEHFPFTRQE LYSLVRVEGI ETFEELLTRH GRGAHGCVIC KPAVGSILAS
     CWNRPITEPS LVPLQDTNDT FMANMQKNGT YSVVPRIPGG EITPDGLIAI GAVAKKYDLY
     TKITGGQRID LFGAQLHELP DIWSELIEAG FETGHAYGKS TRTVKSCVGS TWCRYGVQDS
     VAMALRIEDR YKGLRSPHKL KFAVSGCTRE CAEAQSKDVG VIATENGWNM YVSGNGGMRP
     RHAELFATDL DDETLIRYID RFLMLYIRTA DKLQRTSVWR ESLEGGLDYL KAVIIDDSLG
     LAAELEAQMQ LVVDRYECEW ANALKDPEKL KRFRTFVNDK RADPDVHFVK ERAQRRPARA
     EEVSLIPLYQ EVV
//
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