ID A0A3R9Z4T8_9SPHN Unreviewed; 470 AA.
AC A0A3R9Z4T8;
DT 10-APR-2019, integrated into UniProtKB/TrEMBL.
DT 10-APR-2019, sequence version 1.
DT 03-MAY-2023, entry version 13.
DE SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:RST29782.1};
GN ORFNames=HMF7854_02290 {ECO:0000313|EMBL:RST29782.1};
OS Sphingomonas ginkgonis.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingomonas.
OX NCBI_TaxID=2315330 {ECO:0000313|EMBL:RST29782.1, ECO:0000313|Proteomes:UP000274661};
RN [1] {ECO:0000313|EMBL:RST29782.1, ECO:0000313|Proteomes:UP000274661}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HMF7854 {ECO:0000313|EMBL:RST29782.1,
RC ECO:0000313|Proteomes:UP000274661};
RA Cha I., Kang H., Kim H., Kang J., Joh K.;
RT "Sphingomonas sp. HMF7854 Genome sequencing and assembly.";
RL Submitted (DEC-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RST29782.1}.
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DR EMBL; RWJF01000001; RST29782.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3R9Z4T8; -.
DR OrthoDB; 1123084at2; -.
DR Proteomes; UP000274661; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR026281; HTH_RamB.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR018653; ScfR_C.
DR PANTHER; PTHR46797:SF18; BLL2454 PROTEIN; 1.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR Pfam; PF13560; HTH_31; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR Pfam; PF09856; ScfRs; 1.
DR PIRSF; PIRSF019251; Rv0465c; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000274661};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 14..68
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 470 AA; 51615 MW; B9C084EB632BC5F9 CRC64;
MMATAAKLFL GHRLRRLRKE RGLSQTDMAS TLAISPSYLN HLERNQRPVT AALLLKLADT
YQVDVLSFAS GSGARTGPDE LTEIFADPLL SDLSVPRYEL VELAHNAPTV AEGIARIYAA
LKEAERMPAL AEADDARSLV TPENWVRDYI QAHRNHYPEI EEAAETIGGA LTDPLSVAEP
MRRRLKDAWG ITARVVSQSL LGNLSQAYDP DRRMFLISSQ LRQENRTFAL AYQLAVTEFA
GLFDRMVGDA SPPDEGIAEL LHMHLANYAA GAIMMPYGKF LRSAEEMHYS IDRLCGEYGA
NVEQVAHRLT TLNRPNARGV PFFMLRVDPA GNISKRYAGE KFPFSRFGGT CPKWNLHAAF
QAAGQVVTQL IETPDGHRYF TVARTIERPI KSDLSGGLLA IGLGCDISYA HKLHCAEGID
LDRAPVVAVG PACTICPRID CGYRAAPPAG RKLAVTGNRK TISPYPFVPA
//