ID A0A3S1B380_9BACT Unreviewed; 167 AA.
AC A0A3S1B380;
DT 10-APR-2019, integrated into UniProtKB/TrEMBL.
DT 10-APR-2019, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE SubName: Full=RNA polymerase sigma factor {ECO:0000313|EMBL:NSL90184.1};
GN ORFNames=ECE50_025340 {ECO:0000313|EMBL:NSL90184.1};
OS Chitinophaga solisilvae.
OC Bacteria; Bacteroidota; Chitinophagia; Chitinophagales; Chitinophagaceae;
OC Chitinophaga.
OX NCBI_TaxID=1233460 {ECO:0000313|EMBL:NSL90184.1, ECO:0000313|Proteomes:UP000281028};
RN [1] {ECO:0000313|EMBL:NSL90184.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Mgbs1 {ECO:0000313|EMBL:NSL90184.1};
RA Goh C.B.S., Lee M.S., Parimannan S., Pasbakhsh P., Yule C.M., Rajandas H.,
RA Loke S., Croft L., Tan J.B.L.;
RT "Chitinophaga laudate sp. nov., isolated from a tropical peat swamp.";
RL Submitted (MAY-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:NSL90184.1}.
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DR EMBL; RIAR02000001; NSL90184.1; -; Genomic_DNA.
DR Proteomes; UP000281028; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR039425; RNA_pol_sigma-70-like.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR PANTHER; PTHR43133:SF45; RNA POLYMERASE SIGMA FACTOR-RELATED; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000281028}.
SQ SEQUENCE 167 AA; 19896 MW; 5389573BEF3C714E CRC64;
MKNKEQEFLA LIEANKGIIH KISRMYMDTQ DDQQDLFQEI VCQLWKSYDS FKHQSSFSTW
MYRVALNTAI VFLKKEKRQL RTSDQMPEHI PADDPQAAIR ETQLQHFYRA VQKLERLEKA
LVFYHLENYS HREIAENLGI SEGNARVKLN RAKEKLKTLI KQQGYEF
//
