ID A0A3S3MCM6_9MAGN Unreviewed; 583 AA.
AC A0A3S3MCM6;
DT 10-APR-2019, integrated into UniProtKB/TrEMBL.
DT 10-APR-2019, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE SubName: Full=GATA transcription factor 24-like protein {ECO:0000313|EMBL:RWR77328.1};
GN ORFNames=CKAN_00580900 {ECO:0000313|EMBL:RWR77328.1};
OS Cinnamomum micranthum f. kanehirae.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Magnoliidae; Laurales; Lauraceae; Cinnamomum.
OX NCBI_TaxID=337451 {ECO:0000313|EMBL:RWR77328.1, ECO:0000313|Proteomes:UP000283530};
RN [1] {ECO:0000313|EMBL:RWR77328.1, ECO:0000313|Proteomes:UP000283530}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chaw 1501 {ECO:0000313|Proteomes:UP000283530};
RC TISSUE=Young leaves {ECO:0000313|EMBL:RWR77328.1};
RX PubMed=30626928; DOI=10.1038/s41477-018-0337-0;
RA Chaw S.M., Liu Y.C., Wu Y.W., Wang H.Y., Lin C.I., Wu C.S., Ke H.M.,
RA Chang L.Y., Hsu C.Y., Yang H.T., Sudianto E., Hsu M.H., Wu K.P., Wang L.N.,
RA Leebens-Mack J.H., Tsai I.J.;
RT "Stout camphor tree genome fills gaps in understanding of flowering plant
RT genome evolution.";
RL Nat. Plants 5:63-73(2019).
CC -!- FUNCTION: Transcriptional activator that specifically binds 5'-GATA-3'
CC or 5'-GAT-3' motifs within gene promoters.
CC {ECO:0000256|ARBA:ARBA00002206}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00357}.
CC -!- SIMILARITY: Belongs to the type IV zinc-finger family. Class C
CC subfamily. {ECO:0000256|ARBA:ARBA00007722}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RWR77328.1}.
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DR EMBL; QPKB01000002; RWR77328.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3S3MCM6; -.
DR STRING; 337451.A0A3S3MCM6; -.
DR Proteomes; UP000283530; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00202; ZnF_GATA; 1.
DR Gene3D; 3.30.50.10; Erythroid Transcription Factor GATA-1, subunit A; 1.
DR InterPro; IPR010402; CCT_domain.
DR InterPro; IPR017887; TF_TCP_subgr.
DR InterPro; IPR045280; TIFY-like.
DR InterPro; IPR010399; Tify_dom.
DR InterPro; IPR000679; Znf_GATA.
DR InterPro; IPR013088; Znf_NHR/GATA.
DR PANTHER; PTHR46125; GATA TRANSCRIPTION FACTOR 28; 1.
DR PANTHER; PTHR46125:SF24; GATA TRANSCRIPTION FACTOR 28; 1.
DR Pfam; PF06203; CCT; 1.
DR Pfam; PF00320; GATA; 1.
DR Pfam; PF03634; TCP; 1.
DR Pfam; PF06200; tify; 1.
DR SMART; SM00979; TIFY; 1.
DR SMART; SM00401; ZnF_GATA; 1.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 1.
DR PROSITE; PS51017; CCT; 1.
DR PROSITE; PS00344; GATA_ZN_FINGER_1; 1.
DR PROSITE; PS51369; TCP; 1.
DR PROSITE; PS51320; TIFY; 1.
PE 3: Inferred from homology;
KW Activator {ECO:0000256|ARBA:ARBA00023159};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00357};
KW Reference proteome {ECO:0000313|Proteomes:UP000283530}.
FT DOMAIN 103..138
FT /note="Tify"
FT /evidence="ECO:0000259|PROSITE:PS51320"
FT DOMAIN 177..219
FT /note="CCT"
FT /evidence="ECO:0000259|PROSITE:PS51017"
FT DOMAIN 362..416
FT /note="TCP"
FT /evidence="ECO:0000259|PROSITE:PS51369"
FT REGION 1..53
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 218..243
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 292..313
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 435..469
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 222..238
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 455..469
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 583 AA; 63351 MW; E501F1034E839D09 CRC64;
MPESNLNPQP LNSRPPMYVD EDGHVHQLHD VPVLSGQIDD DGDAGDTVDP YDGQLDVDVL
EEGGGDGIGD DEMMDGEDEE YEEEEIQMDG EALPDPNLAV PLRCRSMNQL TLSFNGEVYI
YPSVSPDKVQ AVLLLLGGRE VASLMPGMQL VPSEQDYRGG ALVESGDIPQ QSNIPQRVAS
LLRFREKRKE RCYEKKIRYN VRKEVALRMQ RHKGQFACKA PTEEAVSTSS NWGSKQNRSQ
DDSPKEAICL QCGTSEKATP VMRRGPAGPK TLCNACGLKW AHKMEAKKQQ IKKEERELEQ
RMGGKGSGSS DDGFAAPLVV TQRIAPPATP QMATQQLVCL KMEPAVEKRR LEYVPLRQSR
ASKDKHTKVE GRGRRIQMPA TCAARIFQLT KELGHKSDGQ TIRWLLEQTE PAIIAATGTG
TVPAIATYVD GTLKIPTQSP FGDDNDRRRR KRTFNSNPPQ IQEKASLSTV STGLAPIGPT
TPATQNIVNL SNLGNLGNLG TQTFLMISPD AIGGPSNQQQ LWTFPAQTGP LINLSAGQPM
STIFSVVPGL NFATAVEVSS TAGSASTTMA GTTSTQVVSN SSK
//
