ID A0A3S3PZZ6_9MAGN Unreviewed; 433 AA.
AC A0A3S3PZZ6;
DT 10-APR-2019, integrated into UniProtKB/TrEMBL.
DT 10-APR-2019, sequence version 1.
DT 27-MAR-2024, entry version 15.
DE SubName: Full=Methyl-CpG-binding domain-containing protein 5 isoform X3 {ECO:0000313|EMBL:RWR76734.1};
GN ORFNames=CKAN_00519100 {ECO:0000313|EMBL:RWR76734.1};
OS Cinnamomum micranthum f. kanehirae.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Magnoliidae; Laurales; Lauraceae; Cinnamomum.
OX NCBI_TaxID=337451 {ECO:0000313|EMBL:RWR76734.1, ECO:0000313|Proteomes:UP000283530};
RN [1] {ECO:0000313|EMBL:RWR76734.1, ECO:0000313|Proteomes:UP000283530}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chaw 1501 {ECO:0000313|Proteomes:UP000283530};
RC TISSUE=Young leaves {ECO:0000313|EMBL:RWR76734.1};
RX PubMed=30626928; DOI=10.1038/s41477-018-0337-0;
RA Chaw S.M., Liu Y.C., Wu Y.W., Wang H.Y., Lin C.I., Wu C.S., Ke H.M.,
RA Chang L.Y., Hsu C.Y., Yang H.T., Sudianto E., Hsu M.H., Wu K.P., Wang L.N.,
RA Leebens-Mack J.H., Tsai I.J.;
RT "Stout camphor tree genome fills gaps in understanding of flowering plant
RT genome evolution.";
RL Nat. Plants 5:63-73(2019).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RWR76734.1}.
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DR EMBL; QPKB01000002; RWR76734.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3S3PZZ6; -.
DR STRING; 337451.A0A3S3PZZ6; -.
DR Proteomes; UP000283530; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR InterPro; IPR016177; DNA-bd_dom_sf.
DR InterPro; IPR038945; MBD13-like.
DR InterPro; IPR001739; Methyl_CpG_DNA-bd.
DR PANTHER; PTHR34067; OS04G0193200 PROTEIN; 1.
DR PANTHER; PTHR34067:SF20; OS08G0206700 PROTEIN; 1.
DR Pfam; PF01429; MBD; 1.
DR SUPFAM; SSF54171; DNA-binding domain; 1.
DR PROSITE; PS50982; MBD; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000283530};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 133..208
FT /note="MBD"
FT /evidence="ECO:0000259|PROSITE:PS50982"
FT REGION 81..137
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 170..221
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 315..337
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 365..400
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 104..137
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 170..204
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 205..221
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 433 AA; 48261 MW; A9AD8FB41D59D9BC CRC64;
MSAESIERNA TPLFYDPQPI SVALPTETES YAEILLGLRR CFPPEPFAVP GETNGNTLSV
AAAVEAVAAL WKERRSGVSP PLEASADLLQ PQVTDPELPV VERASSGDVE ERTTPGTAGS
RRGRKRKTEE EQEEFWSRRP DWLPEGWTTE VKVRTNGATA GMRDRYYFDP KSGHRFRSRK
EVEKFTRTGE VPKNKHKPKT EDSNVVHASS EPPQSSSGEG LSIPYVAIED VPKPNNMMCP
PTLEFFSRRL PNFKSSVRNL NHFNVEEEGG AGRNQQLEVG ETIIKQYERE GTIGIQQCVP
SNVVGLGTVF NLETENETER SHQSEIGREE KGAQKSKAVK KINWKKEARG RRMIIQQSEL
VKEAGVVQQS ETEKKEKSSE QPAPSNISGH EASLSRTKKK APKFDRGIFV QLGREICKRA
IIANLKTGTT NHS
//
