ID A0A3S3QFH8_9MAGN Unreviewed; 1300 AA.
AC A0A3S3QFH8;
DT 10-APR-2019, integrated into UniProtKB/TrEMBL.
DT 10-APR-2019, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE SubName: Full=JmjC domain-containing protein {ECO:0000313|EMBL:RWR83743.1};
GN ORFNames=CKAN_01250600 {ECO:0000313|EMBL:RWR83743.1};
OS Cinnamomum micranthum f. kanehirae.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Magnoliidae; Laurales; Lauraceae; Cinnamomum.
OX NCBI_TaxID=337451 {ECO:0000313|EMBL:RWR83743.1, ECO:0000313|Proteomes:UP000283530};
RN [1] {ECO:0000313|EMBL:RWR83743.1, ECO:0000313|Proteomes:UP000283530}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chaw 1501 {ECO:0000313|Proteomes:UP000283530};
RC TISSUE=Young leaves {ECO:0000313|EMBL:RWR83743.1};
RX PubMed=30626928; DOI=10.1038/s41477-018-0337-0;
RA Chaw S.M., Liu Y.C., Wu Y.W., Wang H.Y., Lin C.I., Wu C.S., Ke H.M.,
RA Chang L.Y., Hsu C.Y., Yang H.T., Sudianto E., Hsu M.H., Wu K.P., Wang L.N.,
RA Leebens-Mack J.H., Tsai I.J.;
RT "Stout camphor tree genome fills gaps in understanding of flowering plant
RT genome evolution.";
RL Nat. Plants 5:63-73(2019).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RWR83743.1}.
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DR EMBL; QPKB01000004; RWR83743.1; -; Genomic_DNA.
DR STRING; 337451.A0A3S3QFH8; -.
DR Proteomes; UP000283530; Unassembled WGS sequence.
DR GO; GO:0140993; F:histone modifying activity; IEA:UniProt.
DR GO; GO:0010468; P:regulation of gene expression; IEA:UniProt.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR Gene3D; 2.60.120.650; Cupin; 1.
DR InterPro; IPR003347; JmjC_dom.
DR InterPro; IPR003349; JmjN.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR10694; LYSINE-SPECIFIC DEMETHYLASE; 1.
DR PANTHER; PTHR10694:SF38; LYSINE-SPECIFIC DEMETHYLASE REF6; 1.
DR Pfam; PF02373; JmjC; 1.
DR Pfam; PF02375; JmjN; 1.
DR SMART; SM00558; JmjC; 1.
DR SMART; SM00545; JmjN; 1.
DR SMART; SM00355; ZnF_C2H2; 4.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 2.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR PROSITE; PS51184; JMJC; 1.
DR PROSITE; PS51183; JMJN; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 3.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 3.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Reference proteome {ECO:0000313|Proteomes:UP000283530};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT DOMAIN 23..64
FT /note="JmjN"
FT /evidence="ECO:0000259|PROSITE:PS51183"
FT DOMAIN 183..352
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
FT DOMAIN 1207..1236
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 1237..1266
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 1267..1298
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT REGION 656..677
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1113..1139
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 661..677
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1300 AA; 144776 MW; D1A94D29595F5423 CRC64;
MASPSTQDAS PEILPWLKSL PLAPEYHPTL AEFQDPISYI LKIEKEASKF GICKIVPPLP
APPKKAAISN LNRSLAARNP HKQPAFTTRQ QQIGFCPRKS RPVQKPVWQS GESYTLQQFE
AKAKHFERTH LRKSPKKGLS ALEVESLFWK ATADKPFSVE YANDMPGSAF AAVSMKGGEA
AATVAETAWN MRRASRAKGS LLRFMKEEIA GVTSPMVYVA MMFSWFAWHV EDHDLHSLNY
LHLGPGKTWY GVPRDAAFAF EEVVRVHGYG GEVNPVVTFA TLGEKTTVMS PEVLIGAGIP
CCRLVQNAGE FVVTFPRAYH SGFSHGFNCG EAANIATPEW LRVAKEAAIR RASINYPPMV
SHFQLLYSLA STLCSRESMS TSNEPRSSRL KDKKRGEGEM MVKELFVKDV TENNDLLHNL
LEKGSSCVLL PRDSLDISLC SNSRIGSQIM VKPRPSLGLC SPEEALEAAG SLLCEDAVLD
RNMRFRHVNG LCQRKRIPSV KYGQYASDFL YASTSDSQNM ESEKEGASQV DGLLDQGLFS
CVTCGILTFA CVAVIQPTEA AAGYLMSADC NPFGDQIVGL GATNDQIYNV TDVRKNNSDM
DTHSGRMEKD DKCGLYDVPV QSADYTIQVS HQRVEPASNS MTQGITSLDL LANAYGDSSD
SEEEGIQHPN KSICSDEHDF DDFSLASSED RRVSLFGQDR QYGSVGVLDQ ASPTPGTRYE
ASTQILSIND RCPKTLNFSP GNVVDNAVSV KPWGLDSISR NPMTTPGSMV TSRVTDFAMV
GHKESDGSWR QCIGTSKISW SDAKMGDPAN CISEGAANGK SIETTLFGDI DSLLKKPNIS
YVQQSDKDSS RMHIFCLEHA VEVEKQLRPI GGLHMLLLCH PDYPKVEAQA KSLAEELGIN
YHWKDVHFRD ATNDDKEKIR SALDDEEVVP GNGDWAVKLG VNLYYSANLS KSPLYSKQMP
YNAVLYKAFG RTSLVSSPTK PKVFARRSSR QKKIVVAGKW CGKVWMSNQV HPYLANRDNP
EQEPVNSSGY CDIDLKLEAD TDVQVERMML SERNLLPCTV LRKSSRKRRK PFEDEDNEKP
KFPKVENTCK VVVDSPRNPS SLSRRILRSR LKHEEMSCSN SSLKDEVGGP STRLRTRPSK
TKEVKAKLKG VKLQPAGERH VIRKKVKKAP SCNDVTIKDE EAEYQCDVEG CSMGFNTKQE
LMLHKRNICS VKGCGKKLFS HKYLVQHRRV HMDDRPLKCP WKGCKMTFKW AWARTEHIRV
HTGARPYVCR EPGCGQTFRF VSDFSRHKRK TGHSVKKGRT
//
