ID A0A3S5WGJ6_9MAGN Unreviewed; 410 AA.
AC A0A3S5WGJ6;
DT 10-APR-2019, integrated into UniProtKB/TrEMBL.
DT 10-APR-2019, sequence version 1.
DT 24-JAN-2024, entry version 17.
DE SubName: Full=RNA-binding protein 1-like protein {ECO:0000313|EMBL:RWR79865.1};
GN ORFNames=CKAN_00846500 {ECO:0000313|EMBL:RWR79865.1};
OS Cinnamomum micranthum f. kanehirae.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Magnoliidae; Laurales; Lauraceae; Cinnamomum.
OX NCBI_TaxID=337451 {ECO:0000313|EMBL:RWR79865.1, ECO:0000313|Proteomes:UP000283530};
RN [1] {ECO:0000313|EMBL:RWR79865.1, ECO:0000313|Proteomes:UP000283530}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chaw 1501 {ECO:0000313|Proteomes:UP000283530};
RC TISSUE=Young leaves {ECO:0000313|EMBL:RWR79865.1};
RX PubMed=30626928; DOI=10.1038/s41477-018-0337-0;
RA Chaw S.M., Liu Y.C., Wu Y.W., Wang H.Y., Lin C.I., Wu C.S., Ke H.M.,
RA Chang L.Y., Hsu C.Y., Yang H.T., Sudianto E., Hsu M.H., Wu K.P., Wang L.N.,
RA Leebens-Mack J.H., Tsai I.J.;
RT "Stout camphor tree genome fills gaps in understanding of flowering plant
RT genome evolution.";
RL Nat. Plants 5:63-73(2019).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RWR79865.1}.
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DR EMBL; QPKB01000003; RWR79865.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3S5WGJ6; -.
DR Proteomes; UP000283530; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd21618; RRM_AtNSRA_like; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR10501:SF73; RRM DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR10501; U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B; 1.
DR Pfam; PF00098; zf-CCHC; 2.
DR SMART; SM00343; ZnF_C2HC; 2.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS50158; ZF_CCHC; 2.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Reference proteome {ECO:0000313|Proteomes:UP000283530};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 25..40
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT DOMAIN 126..141
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT DOMAIN 317..393
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 39..96
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 138..186
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 39..66
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 410 AA; 44671 MW; 33B3D5765AC7393F CRC64;
MRVKPCSHCG KKHDSSKCHK KFGACFQCGE VGHKVNACPQ KQGSQESEAK GNAQKPQAQG
IVDAITQQDA EASKLVAEDH QKHGKRQKTK ASNKSTPLNK KVAAILCNRC GKHHETSKCH
WKSGACFQCG EIGHRVKDCP QKQGSQESEP KGYAQELQAQ GRVDAPTQQD AKASKAIDAP
TQQDEEAPKA IFEDTVQRSS FSVYLSLDTS ALTSNNLYST ANLRGTSSDY LQNDVLPLRS
GAYGLDDIAG IGSHANQGLG GLTTGMSMKG YPTPLEDPIA ISQRHNPSLG TPGIPDIHPE
RSNLFRQTDG LPSDESNVLF VDGLPSNCTR REVAQIRVIH KEPRQSGEKA VVLCFVEFND
AKCALTALEA LQGYKFDDKK SDAPVLRIQF AHFPFRSSSN HDDRRLGSIH
//
