ID A0A401NR96_SCYTO Unreviewed; 601 AA.
AC A0A401NR96;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 24-JAN-2024, entry version 13.
DE RecName: Full=Hemimethylated DNA-binding domain-containing protein {ECO:0000259|SMART:SM00992};
GN ORFNames=scyTo_0009651 {ECO:0000313|EMBL:GCB63362.1};
OS Scyliorhinus torazame (Cloudy catshark).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes;
OC Elasmobranchii; Galeomorphii; Galeoidea; Carcharhiniformes; Scyliorhinidae;
OC Scyliorhinus.
OX NCBI_TaxID=75743 {ECO:0000313|EMBL:GCB63362.1, ECO:0000313|Proteomes:UP000288216};
RN [1] {ECO:0000313|EMBL:GCB63362.1, ECO:0000313|Proteomes:UP000288216}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=30297745; DOI=.1038/s41559-018-0673-5;
RA Hara Y, Yamaguchi K, Onimaru K, Kadota M, Koyanagi M, Keeley SD, Tatsumi K,
RA Tanaka K, Motone F, Kageyama Y, Nozu R, Adachi N, Nishimura O, Nakagawa R,
RA Tanegashima C, Kiyatake I, Matsumoto R, Murakumo K, Nishida K, Terakita A,
RA Kuratani S, Sato K, Hyodo S Kuraku.S.;
RT "Shark genomes provide insights into elasmobranch evolution and the origin
RT of vertebrates.";
RL Nat. Ecol. Evol. 2:1761-1771(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GCB63362.1}.
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DR EMBL; BFAA01004002; GCB63362.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A401NR96; -.
DR STRING; 75743.A0A401NR96; -.
DR OMA; LCVITGW; -.
DR Proteomes; UP000288216; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR Gene3D; 1.20.1280.50; -; 1.
DR Gene3D; 2.30.30.390; Hemimethylated DNA-binding domain; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR011722; Hemimethylated_DNA-bd_dom.
DR InterPro; IPR036623; Hemimethylated_DNA-bd_sf.
DR InterPro; IPR032698; SirB1_N.
DR NCBIfam; TIGR02097; yccV; 1.
DR PANTHER; PTHR31350:SF21; F-BOX ONLY PROTEIN 21; 1.
DR PANTHER; PTHR31350; SI:DKEY-261L7.2; 1.
DR Pfam; PF12937; F-box-like; 1.
DR Pfam; PF13369; Transglut_core2; 1.
DR Pfam; PF08755; YccV-like; 1.
DR SMART; SM00992; YccV-like; 1.
DR SUPFAM; SSF81383; F-box domain; 1.
DR SUPFAM; SSF141255; YccV-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000288216}.
FT DOMAIN 479..576
FT /note="Hemimethylated DNA-binding"
FT /evidence="ECO:0000259|SMART:SM00992"
SQ SEQUENCE 601 AA; 69098 MW; 9F15D0DA0B9BF153 CRC64;
MAELAVWPGG EGAMGGLTGL PEELLEQIFC CPLLNHVDVV SVCLTCKKLH EVCQARSAVW
KHQFRQRWPT LIKYYSTTGS HNWWEEYRIR HSVGGQVQRI VDTFSKRFFT KEVPVDGFKD
IEALGGSFHF VADELMSILN MDGRKYLTWK FYSRKLLCFL RQQDIMEKLK EFLTTPPEHQ
KLIEGVVLVD QYCNPLADTS LENVLLQLNC ITEEVKKMLC LKHSSHPSIT AERDGEMCID
DLGQQQQVLD AMNCVLYKQL KFKGNEDDYY NPMNSYICQV LTQKKGIPIT LCVIYSTIGK
NLGLRLEPVS FPSHFLLRWC QKLDGSTDIL DYVYIDAFDN GKSCTAKECE YLIGQKVASK
FYSSVTTKDV LFRMITNLFH LGKREGSDQS YQLLRNALDL YLTLAPDDVQ YLMLQARLYF
HLGINPEKVL DILQHIQAVD PSQHGVVGHL VQLTMEQIAR KNQTTEVAVK RHTDEKHRKI
EFSVGLIMKH KRYGYNCVIY GWDPKCMMGL DWMRTMGVHN LPHGPDQPFY NVLVQDGSCR
YAAQENLICN ASPLEISHEE VGRYFSEFSG THYIANEELQ IQYPDDMVLT SQLVEKVYGH
S
//