ID A0A401NWZ4_SCYTO Unreviewed; 589 AA.
AC A0A401NWZ4;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE RecName: Full=PHD-type domain-containing protein {ECO:0000259|PROSITE:PS50016};
DE Flags: Fragment;
GN ORFNames=scyTo_0011868 {ECO:0000313|EMBL:GCB65398.1};
OS Scyliorhinus torazame (Cloudy catshark).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes;
OC Elasmobranchii; Galeomorphii; Galeoidea; Carcharhiniformes; Scyliorhinidae;
OC Scyliorhinus.
OX NCBI_TaxID=75743 {ECO:0000313|EMBL:GCB65398.1, ECO:0000313|Proteomes:UP000288216};
RN [1] {ECO:0000313|EMBL:GCB65398.1, ECO:0000313|Proteomes:UP000288216}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=30297745; DOI=.1038/s41559-018-0673-5;
RA Hara Y, Yamaguchi K, Onimaru K, Kadota M, Koyanagi M, Keeley SD, Tatsumi K,
RA Tanaka K, Motone F, Kageyama Y, Nozu R, Adachi N, Nishimura O, Nakagawa R,
RA Tanegashima C, Kiyatake I, Matsumoto R, Murakumo K, Nishida K, Terakita A,
RA Kuratani S, Sato K, Hyodo S Kuraku.S.;
RT "Shark genomes provide insights into elasmobranch evolution and the origin
RT of vertebrates.";
RL Nat. Ecol. Evol. 2:1761-1771(2018).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GCB65398.1}.
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DR EMBL; BFAA01005559; GCB65398.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A401NWZ4; -.
DR STRING; 75743.A0A401NWZ4; -.
DR OMA; TARCCEE; -.
DR Proteomes; UP000288216; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 2.30.30.140; -; 1.
DR Gene3D; 3.90.980.20; -; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR040477; KDM4-like_Tudor.
DR InterPro; IPR025894; Mtf2_C_dom.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR12628:SF6; PHD FINGER PROTEIN 19; 1.
DR PANTHER; PTHR12628; POLYCOMB-LIKE TRANSCRIPTION FACTOR; 1.
DR Pfam; PF14061; Mtf2_C; 1.
DR Pfam; PF00628; PHD; 1.
DR Pfam; PF18104; Tudor_2; 1.
DR SMART; SM00249; PHD; 2.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 2.
DR SUPFAM; SSF63748; Tudor/PWWP/MBT; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000288216};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 99..154
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT REGION 458..478
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:GCB65398.1"
SQ SEQUENCE 589 AA; 66802 MW; E3FF70EB49178B4F CRC64;
REARLSEGKT TVKWKRVCVG QTEREAVGGA DGERRIGTTT ARCCEEQYVL SRWTDGLLYL
GKIKKVNKHK RNCLLVFEDN SEFWILWKDI QHAGVPGEEP RCNICSEKTS TAPNEILICG
KCGLGYHQQC HNPKVDSTTN ASTSPWFCRQ CIFALAVRKG GALKKGPLAK ALQIVKRVLP
YNMDELNWDS LHRTNLQQCY CYCGGPGEWY LKMLQCCRCK QWFHEACTQC LSEAMMFGDR
FYLFVCSVCN KGPEYIKRIP LRWVDVVHLV LYNLGVCGKK KYFDFEEEIL IFINQNWLSL
QLGKLTEMTV HERKPHLLGA LNSYKSRFIC GKEIKKKKCI FRLRTRVPPV PPNIILPENV
GQLTDNGSNE IKRRGKNMLV FAPKYGPLPE VPQPRRRRLP LKRGLKCRKS NWFLQDAVPE
SDFSTAESTS YYLANIFDFT VDDIQSLKSD CSEGTFNSDL DSTDAASTSG SASTSLSCDS
LKTVGSRKRK APLEYSLNGR NKQNEGIHDP GNGVDETERH MDNNYTNGHT FDSMSDDETS
LSHLKSSITN YFGAAGRLAC GEKFQVLARR LTPDGTVQYL VEWEGATPY
//
