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Database: UniProt
Entry: A0A401PS29_SCYTO
LinkDB: A0A401PS29_SCYTO
Original site: A0A401PS29_SCYTO 
ID   A0A401PS29_SCYTO        Unreviewed;       482 AA.
AC   A0A401PS29;
DT   08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT   08-MAY-2019, sequence version 1.
DT   24-JAN-2024, entry version 18.
DE   RecName: Full=E3 ubiquitin-protein ligase TRIM39-like {ECO:0008006|Google:ProtNLM};
GN   ORFNames=scyTo_0018283 {ECO:0000313|EMBL:GCB75946.1};
OS   Scyliorhinus torazame (Cloudy catshark).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes;
OC   Elasmobranchii; Galeomorphii; Galeoidea; Carcharhiniformes; Scyliorhinidae;
OC   Scyliorhinus.
OX   NCBI_TaxID=75743 {ECO:0000313|EMBL:GCB75946.1};
RN   [1] {ECO:0000313|EMBL:GCB75946.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=30297745; DOI=.1038/s41559-018-0673-5;
RA   Hara Y, Yamaguchi K, Onimaru K, Kadota M, Koyanagi M, Keeley SD, Tatsumi K,
RA   Tanaka K, Motone F, Kageyama Y, Nozu R, Adachi N, Nishimura O, Nakagawa R,
RA   Tanegashima C, Kiyatake I, Matsumoto R, Murakumo K, Nishida K, Terakita A,
RA   Kuratani S, Sato K, Hyodo S Kuraku.S.;
RT   "Shark genomes provide insights into elasmobranch evolution and the origin
RT   of vertebrates.";
RL   Nat. Ecol. Evol. 2:1761-1771(2018).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:GCB75946.1}.
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DR   EMBL; BFAA01012577; GCB75946.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A401PS29; -.
DR   STRING; 75743.A0A401PS29; -.
DR   OMA; RRNNDEY; -.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   CDD; cd19800; Bbox2_xNF7-like; 1.
DR   CDD; cd16594; RING-HC_TRIM7-like_C-IV; 1.
DR   CDD; cd13733; SPRY_PRY_C-I_1; 1.
DR   Gene3D; 2.60.120.920; -; 1.
DR   Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR   Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR   InterPro; IPR001870; B30.2/SPRY.
DR   InterPro; IPR043136; B30.2/SPRY_sf.
DR   InterPro; IPR003879; Butyrophylin_SPRY.
DR   InterPro; IPR013320; ConA-like_dom_sf.
DR   InterPro; IPR006574; PRY.
DR   InterPro; IPR003877; SPRY_dom.
DR   InterPro; IPR027370; Znf-RING_euk.
DR   InterPro; IPR000315; Znf_B-box.
DR   InterPro; IPR001841; Znf_RING.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   InterPro; IPR017907; Znf_RING_CS.
DR   PANTHER; PTHR24103; E3 UBIQUITIN-PROTEIN LIGASE TRIM; 1.
DR   PANTHER; PTHR24103:SF611; E3 UBIQUITIN-PROTEIN LIGASE TRIM7; 1.
DR   Pfam; PF13765; PRY; 1.
DR   Pfam; PF00622; SPRY; 1.
DR   Pfam; PF00643; zf-B_box; 1.
DR   Pfam; PF13445; zf-RING_UBOX; 1.
DR   PRINTS; PR01407; BUTYPHLNCDUF.
DR   SMART; SM00336; BBOX; 1.
DR   SMART; SM00589; PRY; 1.
DR   SMART; SM00184; RING; 1.
DR   SMART; SM00449; SPRY; 1.
DR   SUPFAM; SSF57845; B-box zinc-binding domain; 1.
DR   SUPFAM; SSF49899; Concanavalin A-like lectins/glucanases; 1.
DR   SUPFAM; SSF57850; RING/U-box; 1.
DR   PROSITE; PS50188; B302_SPRY; 1.
DR   PROSITE; PS50119; ZF_BBOX; 1.
DR   PROSITE; PS00518; ZF_RING_1; 1.
DR   PROSITE; PS50089; ZF_RING_2; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW   ProRule:PRU00024}.
FT   DOMAIN          16..56
FT                   /note="RING-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50089"
FT   DOMAIN          86..127
FT                   /note="B box-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50119"
FT   DOMAIN          276..481
FT                   /note="B30.2/SPRY"
FT                   /evidence="ECO:0000259|PROSITE:PS50188"
FT   COILED          70..97
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          185..241
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   482 AA;  55183 MW;  EB37509EEFAD1200 CRC64;
     MALRQQVQSL TEEAMCSICL DLFANPVTLD CGHNFCRSCI TQCWENNEIN SCPDCRAAFP
     ERNLSTNWAL ANLTEKARKL NRKEKESKLH CEKHQEELKL LCETDKKLIC LICRDSREHR
     EHRFLPIKEA VKKHKDQLKS SIDSLTAKTS AVLETELKQK RKISEVRKQS SSLQTYITSE
     FSKMHQILTE KEQRLLRDLR KEEERILEPM EKNLREIQEN LNSMEENLSK LQKQMKQKDE
     LIFLKEEACQ KRRNNDEYHL LSVSAAALSI GKFKDLLQYT AWREMITSIN PAPASLTLDL
     NTANPRLILS EDRTSVRLGS SIFFHYQAMF QLLPDTPERF NPWPFVLGSE GFTSGRHYWE
     VAVGEKTEWG LGVTRESVNR KGRKSPSPES GFWIVGLEPG SGYFAATLPS DTPLILSVNP
     RKIGVFLDYE GGQVSFSNAD NMSHLHTFTH TFTEKIFPIF SPGWKVGGKN SAPLTICGTK
     GH
//
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