ID A0A401PZQ6_SCYTO Unreviewed; 530 AA.
AC A0A401PZQ6;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE RecName: Full=Heterochromatin protein 1-binding protein 3 {ECO:0000256|ARBA:ARBA00019297};
DE Flags: Fragment;
GN ORFNames=scyTo_0020691 {ECO:0000313|EMBL:GCB78598.1};
OS Scyliorhinus torazame (Cloudy catshark).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes;
OC Elasmobranchii; Galeomorphii; Galeoidea; Carcharhiniformes; Scyliorhinidae;
OC Scyliorhinus.
OX NCBI_TaxID=75743 {ECO:0000313|EMBL:GCB78598.1, ECO:0000313|Proteomes:UP000288216};
RN [1] {ECO:0000313|EMBL:GCB78598.1, ECO:0000313|Proteomes:UP000288216}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=30297745; DOI=.1038/s41559-018-0673-5;
RA Hara Y, Yamaguchi K, Onimaru K, Kadota M, Koyanagi M, Keeley SD, Tatsumi K,
RA Tanaka K, Motone F, Kageyama Y, Nozu R, Adachi N, Nishimura O, Nakagawa R,
RA Tanegashima C, Kiyatake I, Matsumoto R, Murakumo K, Nishida K, Terakita A,
RA Kuratani S, Sato K, Hyodo S Kuraku.S.;
RT "Shark genomes provide insights into elasmobranch evolution and the origin
RT of vertebrates.";
RL Nat. Ecol. Evol. 2:1761-1771(2018).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GCB78598.1}.
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DR EMBL; BFAA01017104; GCB78598.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A401PZQ6; -.
DR STRING; 75743.A0A401PZQ6; -.
DR OMA; GYSHTVC; -.
DR Proteomes; UP000288216; Unassembled WGS sequence.
DR GO; GO:0000786; C:nucleosome; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006334; P:nucleosome assembly; IEA:InterPro.
DR CDD; cd00073; H15; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 3.
DR InterPro; IPR005818; Histone_H1/H5_H15.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR15832:SF1; HETEROCHROMATIN PROTEIN 1-BINDING PROTEIN 3; 1.
DR PANTHER; PTHR15832; SHC (SRC HOMOLOGY DOMAIN C-TERMINAL) ADAPTOR HOMOLOG; 1.
DR Pfam; PF00538; Linker_histone; 3.
DR SMART; SM00526; H15; 3.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 3.
DR PROSITE; PS51504; H15; 3.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000288216}.
FT DOMAIN 134..209
FT /note="H15"
FT /evidence="ECO:0000259|PROSITE:PS51504"
FT DOMAIN 233..308
FT /note="H15"
FT /evidence="ECO:0000259|PROSITE:PS51504"
FT DOMAIN 316..391
FT /note="H15"
FT /evidence="ECO:0000259|PROSITE:PS51504"
FT REGION 29..109
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 403..530
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 68..109
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 407..432
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 443..461
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 471..500
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:GCB78598.1"
SQ SEQUENCE 530 AA; 58852 MW; 8CE631FF1A5E12AE CRC64;
FLQCHNFQSD SACWASSVIE ISIANMPIRR NASPSAQETP VKNKPTADAD VTSEESVSAE
EEPENDTSAP EEEKKEAEKS GDEEKETKSS EEPKKEEKEP TKDKKIKKTI PSWATLSASQ
LARVQKNSQI GSTARPKMDA IVIEAIKACF QKSGASVVAI RKYIINKYPS LELERRGYIL
KQALKREMQR GAIKQVKGKG ASGSFVVVAN AGKQTNKSKQ DKKKTTSAGP VEQPIKLEDA
LPLAFTKLCE PKEASYSLIK KYLLQYYPKL NAESRPYLLK QALQRAVDKG QVEQITGKGA
SGTFQLKRAG DKPLLSGGPF EDAILSAITA MNEPKTCSTT ALKKYVTEKV PATNSNFQMH
MLKRTLQKCE KNGWIEQISG KGFSGSFQLC FPFYPSPRVL FPEKQHEEEE EESEEEEEDD
DEEQSESEEE ESDDEPPKKR HKAVPQAKAK LQKRKTATPK KIVAAKRSTP SRKVSAKKVA
KKSRPAPVKL AKKPAAVKKS RHGSPKMSPA TPKKVKGPVK TTRHSQRQRK
//
