ID A0A401RHG5_CHIPU Unreviewed; 563 AA.
AC A0A401RHG5;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 27-MAR-2024, entry version 12.
DE RecName: Full=PAS domain-containing protein {ECO:0000259|PROSITE:PS50112};
GN ORFNames=chiPu_0020610 {ECO:0000313|EMBL:GCC17598.1};
OS Chiloscyllium punctatum (Brownbanded bambooshark) (Hemiscyllium punctatum).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes;
OC Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Hemiscylliidae;
OC Chiloscyllium.
OX NCBI_TaxID=137246 {ECO:0000313|EMBL:GCC17598.1, ECO:0000313|Proteomes:UP000287033};
RN [1] {ECO:0000313|EMBL:GCC17598.1, ECO:0000313|Proteomes:UP000287033}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=30297745; DOI=.1038/s41559-018-0673-5;
RA Hara Y, Yamaguchi K, Onimaru K, Kadota M, Koyanagi M, Keeley SD, Tatsumi K,
RA Tanaka K, Motone F, Kageyama Y, Nozu R, Adachi N, Nishimura O, Nakagawa R,
RA Tanegashima C, Kiyatake I, Matsumoto R, Murakumo K, Nishida K, Terakita A,
RA Kuratani S, Sato K, Hyodo S Kuraku.S.;
RT "Shark genomes provide insights into elasmobranch evolution and the origin
RT of vertebrates.";
RL Nat. Ecol. Evol. 2:1761-1771(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GCC17598.1}.
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DR EMBL; BEZZ01002747; GCC17598.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A401RHG5; -.
DR STRING; 137246.A0A401RHG5; -.
DR Proteomes; UP000287033; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00130; PAS; 2.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR PANTHER; PTHR23043; HYPOXIA-INDUCIBLE FACTOR 1 ALPHA; 1.
DR PANTHER; PTHR23043:SF7; HYPOXIA-INDUCIBLE FACTOR 1-ALPHA; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF14598; PAS_11; 1.
DR SMART; SM00091; PAS; 2.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 2.
DR PROSITE; PS50112; PAS; 2.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000287033};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 518..539
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 21..89
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 172..223
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
SQ SEQUENCE 563 AA; 63732 MW; E00DED3D688AFE88 CRC64;
MQVFLSVSGD SEQGPGCLLG LSSELDSLLD GFLLLLSQSG KVTFTGENVH RYLGLTQLEL
MGQNIFDFVH PYDQRELQEA LMFKQVDGQK TNRRESRDFF IRVKCTVTND SKMVNLRLAS
WKVLHCSGFF WTPQGNRRVD TRPYLILICD PIPFPLNLEP SAKGQSFLTY HSLDMKFIYC
DSRVKDLIGF DADQLVGHSI YSFIHTFDLS HIWKRHFSLL KMGQISSGLY RMLHYFGGYI
WVQTEATLVY ENQNTRSPFV ICNNYILSRP EQEEILFSIE QTKSDTGGRG LPTATVLPRD
AKCAHIGPRH RLDQQGHQPC EVSETEALEV GITGMQWSYQ HHNLQHPLSS TDAVPQSQRL
AFENSRLLGL VSGAALTNPT LTSFRNMTLR PSTLFSAASS SNLTEEWFAD HNLENLAPFI
PMEDEEFQMI PVENSWLRDV PGYQTLHHRG NCETARFSSS SVCELSLRRG IKRNHQTDLT
CDLAVSNLQL NSLADQLTKQ WELPAEELRV EPHHSDQLSL SGLSLVLVVC LAVILGSACM
MRRQVIMANT NNNKSVGGRR RSI
//
