ID A0A401SLV7_CHIPU Unreviewed; 952 AA.
AC A0A401SLV7;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 24-JAN-2024, entry version 17.
DE RecName: Full=IF rod domain-containing protein {ECO:0000259|PROSITE:PS51842};
GN ORFNames=chiPu_0009815 {ECO:0000313|EMBL:GCC31358.1};
OS Chiloscyllium punctatum (Brownbanded bambooshark) (Hemiscyllium punctatum).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes;
OC Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Hemiscylliidae;
OC Chiloscyllium.
OX NCBI_TaxID=137246 {ECO:0000313|EMBL:GCC31358.1, ECO:0000313|Proteomes:UP000287033};
RN [1] {ECO:0000313|EMBL:GCC31358.1, ECO:0000313|Proteomes:UP000287033}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=30297745; DOI=.1038/s41559-018-0673-5;
RA Hara Y, Yamaguchi K, Onimaru K, Kadota M, Koyanagi M, Keeley SD, Tatsumi K,
RA Tanaka K, Motone F, Kageyama Y, Nozu R, Adachi N, Nishimura O, Nakagawa R,
RA Tanegashima C, Kiyatake I, Matsumoto R, Murakumo K, Nishida K, Terakita A,
RA Kuratani S, Sato K, Hyodo S Kuraku.S.;
RT "Shark genomes provide insights into elasmobranch evolution and the origin
RT of vertebrates.";
RL Nat. Ecol. Evol. 2:1761-1771(2018).
CC -!- SIMILARITY: Belongs to the intermediate filament family.
CC {ECO:0000256|RuleBase:RU000685}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GCC31358.1}.
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DR EMBL; BEZZ01000357; GCC31358.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A401SLV7; -.
DR STRING; 137246.A0A401SLV7; -.
DR OMA; HATKSAM; -.
DR Proteomes; UP000287033; Unassembled WGS sequence.
DR GO; GO:0005883; C:neurofilament; IEA:InterPro.
DR GO; GO:0061564; P:axon development; IEA:InterPro.
DR Gene3D; 1.20.5.170; -; 1.
DR Gene3D; 1.20.5.500; Single helix bin; 1.
DR Gene3D; 1.20.5.1160; Vasodilator-stimulated phosphoprotein; 1.
DR InterPro; IPR018039; IF_conserved.
DR InterPro; IPR039008; IF_rod_dom.
DR InterPro; IPR033183; NF-H.
DR PANTHER; PTHR23214:SF1; NEUROFILAMENT HEAVY POLYPEPTIDE; 1.
DR PANTHER; PTHR23214; NEUROFILAMENT TRIPLET H PROTEIN; 1.
DR Pfam; PF00038; Filament; 1.
DR SMART; SM01391; Filament; 1.
DR SUPFAM; SSF64593; Intermediate filament protein, coiled coil region; 2.
DR PROSITE; PS00226; IF_ROD_1; 1.
DR PROSITE; PS51842; IF_ROD_2; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Intermediate filament {ECO:0000256|ARBA:ARBA00022754,
KW ECO:0000256|RuleBase:RU000685};
KW Reference proteome {ECO:0000313|Proteomes:UP000287033}.
FT DOMAIN 88..399
FT /note="IF rod"
FT /evidence="ECO:0000259|PROSITE:PS51842"
FT REGION 20..42
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 419..952
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 78..175
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 283..370
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 28..42
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 421..472
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 481..810
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 821..952
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 952 AA; 108346 MW; CFA14AD289612624 CRC64;
MSYSLDTMLS ASSYRRALGG DPARLATSRS PASLSSSGFY SHSWSRSVGS APSSKRAAAG
GFGSQVTVSG DSLGETALLN GEARARNEKE LLQALNDRFA TYIDKVRSLE LQNKELEAEA
ASLRQQQAGR SAIGEMYERE IRDLRTLVAQ VSHDKAQLQL EQEHLEEDIQ HIRQRHEDES
RLREEIDASV RALAKHTEDA GLLKLELSKR LQFLSDEASA MRAGHQDEVR ELLSQIQGSP
VTLEVRDSLK SDITAALREI RAQMEGQAVT TTSQTEEVFR VKLEKLNQAA KVNTDAIHAA
QDEILEYRRH LQSKNTELET LKGTKDSLER QMYEMEDRHN ADLSTYQEAA QQLENELRNM
KWEMAAQLRE YQDLLNVKMA LDIEIAAYRK LLEGEESRFI GTPPYPYIDH KVPTLPNHIK
TKTVEKLKPE DKGKDLVGEQ MDEKTEETTK EREKAEEGKE DEEKASKDDE KAESEEAAEE
EAEKAEKSDQ ETKSDEETVK EKDTTTEEVE EDKAKSTVIV KEKEKIVEEE DEKEQPKKKQ
EADSTKEQKE PADKIKPVEP TPKVKEDKEK DKTEDEAEPK EPKVEKEKEA KEPSKLDDVE
KEKEAKPKHK DEEKKDTKPE PKPEEKKEVK PEPKAEEKKE VKPEPKAEEK KEVKPEPKAE
EKKEVKPEPK AEEKKETKPE PKAEEKKETK PEPKAEEKKE TKPEPKAEEK KETKPEPKAE
EKKEVKPVPK AEEKEVKPEP KAEEKKETKS EPKAEEKKEM KPEPKAEEKK ETKPEPKAEE
KKEVKPEPKA EEKKETKPEP KDEAKEKKGT SVPEPMPQAK IEKTEPSKDE SKKSTKVEPT
TPDPTTKVKE AEKTEAKDEV TDQSKESKKE TKDEVTETVK KTEVKKSAPE STNIQKDKEA
VKEQISKESV KAKVSEIKEE TQVKDDKEGK SEKSSSTKEE TKTTDKTKKA EE
//
