ID A0A401UC38_9BACT Unreviewed; 456 AA.
AC A0A401UC38;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 27-MAR-2024, entry version 11.
DE SubName: Full=DNA polymerase III subunit epsilon {ECO:0000313|EMBL:GCC52435.1};
GN ORFNames=SanaruYs_26720 {ECO:0000313|EMBL:GCC52435.1};
OS Chryseotalea sanaruensis.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cytophagaceae;
OC Chryseotalea.
OX NCBI_TaxID=2482724 {ECO:0000313|EMBL:GCC52435.1, ECO:0000313|Proteomes:UP000288227};
RN [1] {ECO:0000313|EMBL:GCC52435.1, ECO:0000313|Proteomes:UP000288227}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ys {ECO:0000313|EMBL:GCC52435.1,
RC ECO:0000313|Proteomes:UP000288227};
RA Maejima Y., Iino T., Muraguchi Y., Fukuda K., Ohkuma M., Moriuchi R.,
RA Dohra H., Kimbara K., Shintani M.;
RT "Chryseotalea sanarue gen. nov., sp., nov., a member of the family
RT Cytophagaceae, isolated from a brackish lake in Hamamatsu Japan.";
RL Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GCC52435.1}.
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DR EMBL; BHXQ01000005; GCC52435.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A401UC38; -.
DR OrthoDB; 9803913at2; -.
DR Proteomes; UP000288227; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProt.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR CDD; cd06127; DEDDh; 1.
DR CDD; cd10434; GIY-YIG_UvrC_Cho; 1.
DR Gene3D; 3.40.1440.10; GIY-YIG endonuclease; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR006054; DnaQ.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR000305; GIY-YIG_endonuc.
DR InterPro; IPR035901; GIY-YIG_endonuc_sf.
DR InterPro; IPR047296; GIY-YIG_UvrC_Cho.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; TIGR00573; dnaq; 1.
DR PANTHER; PTHR30231; DNA POLYMERASE III SUBUNIT EPSILON; 1.
DR PANTHER; PTHR30231:SF4; PROTEIN NEN2; 1.
DR Pfam; PF01541; GIY-YIG; 1.
DR Pfam; PF00929; RNase_T; 1.
DR SMART; SM00479; EXOIII; 1.
DR SMART; SM00465; GIYc; 1.
DR SUPFAM; SSF82771; GIY-YIG endonuclease; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50164; GIY_YIG; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000288227}.
FT DOMAIN 196..274
FT /note="GIY-YIG"
FT /evidence="ECO:0000259|PROSITE:PS50164"
SQ SEQUENCE 456 AA; 51848 MW; E01EC9900F1DF0E2 CRC64;
MYAIVDIETT GGYAENHRIT EIAIVHHDGL QVGKSFRTLV NPVRNIPSYI TGLTGITNEM
VLTAPRFEEV AEDILKMLEG KVFVAHNAHF DYSFLKKEFE QAGINWQTKK LCTVRLSRKI
IPGLRSYSLG SIAESLGIKI TNRHRASGDA EATVKVFDVL IQRDKDGQIA KALKRNSGET
ILPPNLPKED FDTLPAKAGV YYFLNARGSV IYVGKAANIK KRIAGHFSGD AREWSRQNIR
NEIHRIRYEL TGNEMLALIF ESQEIRRLWP KYNQAQKHRV EEWGIYAYED RNGYLRFSVN
TVMRGSQPLV RLSSKGDAWN FLWEKVHAYE LCPKLCGLQV TKGLCFQHQT GECHGACQEI
ETSKKYNKRV SKMLDTLQQK GESLVIIGKG RTQYEKSLVL VKEGTYYGHG FAERKQSIET
FTDVQQLVRP GVETPTIHNL ISSYLTSVKE DEVIVF
//
