ID A0A401UGH9_9CLOT Unreviewed; 720 AA.
AC A0A401UGH9;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 24-JAN-2024, entry version 12.
DE SubName: Full=RNA-binding protein {ECO:0000313|EMBL:GCD08589.1};
GN ORFNames=Ctaglu_02120 {ECO:0000313|EMBL:GCD08589.1};
OS Clostridium tagluense.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=360422 {ECO:0000313|EMBL:GCD08589.1, ECO:0000313|Proteomes:UP000287872};
RN [1] {ECO:0000313|EMBL:GCD08589.1, ECO:0000313|Proteomes:UP000287872}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A121 {ECO:0000313|EMBL:GCD08589.1,
RC ECO:0000313|Proteomes:UP000287872};
RA Murakami T., Segawa T., Shcherbakova V.A., Mori H., Yoshimura Y.;
RT "Genome sequencing and assembly of Clostridium tagluense strain A121.";
RL Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GCD08589.1}.
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DR EMBL; BHYK01000001; GCD08589.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A401UGH9; -.
DR OrthoDB; 9804714at2; -.
DR Proteomes; UP000287872; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000287872}.
FT DOMAIN 649..718
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 720 AA; 80576 MW; D33B1875027D5D0E CRC64;
MENIESRLIS EFGISKEQSE SVIQLLDEGN TVPFIARYRK ERTGGLDDIV LRNFTERLIY
LRNLEGRKTD VLRIIGEQEN LTEEIENSIK KCETLTEIED IYRPFKPKKR TRAIIAIEKG
LKPLAEIIFS GEFKGDINEY AQKFISQEKG VTTAMEAFEG AGDIISEMIS DEADFRKWIR
ALVHNQGIVE TKGASDETTP FEMYYEYKEG VKSIPPHRIL AINRGESSKI LSVKIKADND
KINQYLRDKC LKGNSETDKY IELSIVDSVK RLIFPSIERE IRSELTEKGE IGAIEIFKAN
LKALLMQSPI KGKVVLGFDP GFRTGCKIAV LDDTGKVLDM ATVYATAGSK DGVQKSIGII
KALVNKHNVE VISLGNGTAS RESEEILAQI IKELKEECAK DLYYVIVSEA GASVYSASEL
ASKEYPDIDV SIRGAISIGR RLQDPLVELV KIDPKAIGVG QYQHDVTPKK LDESLKGVVE
DCVNAVGVDL NIATPSLLSY ISGINATIAQ NIVAYREENG KFIARKELLK VKRLGAKAYE
QCAGFLRVME SKEFLDNTSV HPESYNATKK MLDFLQYTKE DLKSLNFKDM DERVKNINLN
ELAEKLEIGV PTLRDIIKEI KKPGRDPREE LPKPLLKTGV VQMSHLKPGM KLMGTVRNVS
DFGAFVDIGV HQDGLVHISQ LSDKFVKHPL DVVTVGDIVE VSVLEVDEKR KRISLSMKNI
//
