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Database: UniProt
Entry: A0A409YDX9_9AGAR
LinkDB: A0A409YDX9_9AGAR
Original site: A0A409YDX9_9AGAR 
ID   A0A409YDX9_9AGAR        Unreviewed;       514 AA.
AC   A0A409YDX9;
DT   08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT   08-MAY-2019, sequence version 1.
DT   08-NOV-2023, entry version 16.
DE   RecName: Full=RNA-binding S4 domain-containing protein {ECO:0000259|SMART:SM00363};
GN   ORFNames=CVT26_016076 {ECO:0000313|EMBL:PPR01195.1};
OS   Gymnopilus dilepis.
OC   Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC   Agaricomycetidae; Agaricales; Agaricineae; Hymenogastraceae; Gymnopilus.
OX   NCBI_TaxID=231916 {ECO:0000313|EMBL:PPR01195.1, ECO:0000313|Proteomes:UP000284706};
RN   [1] {ECO:0000313|EMBL:PPR01195.1, ECO:0000313|Proteomes:UP000284706}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=SRW20 {ECO:0000313|EMBL:PPR01195.1,
RC   ECO:0000313|Proteomes:UP000284706};
RX   PubMed=30283667; DOI=10.1002/evl3.42;
RA   Reynolds H.T., Vijayakumar V., Gluck-Thaler E., Korotkin H.B.,
RA   Matheny P.B., Slot J.C.;
RT   "Horizontal gene cluster transfer increased hallucinogenic mushroom
RT   diversity.";
RL   Evol. Lett. 2:88-101(2018).
CC   -!- SUBCELLULAR LOCATION: Endoplasmic reticulum membrane
CC       {ECO:0000256|ARBA:ARBA00004477}; Multi-pass membrane protein
CC       {ECO:0000256|ARBA:ARBA00004477}. Membrane
CC       {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein
CC       {ECO:0000256|ARBA:ARBA00004141}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uS4 family.
CC       {ECO:0000256|ARBA:ARBA00007465}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:PPR01195.1}.
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DR   EMBL; NHYE01000960; PPR01195.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A409YDX9; -.
DR   STRING; 231916.A0A409YDX9; -.
DR   InParanoid; A0A409YDX9; -.
DR   OrthoDB; 1347927at2759; -.
DR   Proteomes; UP000284706; Unassembled WGS sequence.
DR   GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   CDD; cd00165; S4; 1.
DR   Gene3D; 3.10.290.10; RNA-binding S4 domain; 1.
DR   InterPro; IPR022801; Ribosomal_uS4.
DR   InterPro; IPR018079; Ribosomal_uS4_CS.
DR   InterPro; IPR002942; S4_RNA-bd.
DR   InterPro; IPR036986; S4_RNA-bd_sf.
DR   InterPro; IPR024512; Ser_palmitoyltrfase_ssu-like.
DR   PANTHER; PTHR11831; 30S 40S RIBOSOMAL PROTEIN; 1.
DR   PANTHER; PTHR11831:SF4; 37S RIBOSOMAL PROTEIN NAM9, MITOCHONDRIAL; 1.
DR   Pfam; PF01479; S4; 1.
DR   Pfam; PF11779; SPT_ssu-like; 1.
DR   SMART; SM00363; S4; 1.
DR   SUPFAM; SSF55174; Alpha-L RNA-binding motif; 1.
DR   PROSITE; PS00632; RIBOSOMAL_S4; 1.
DR   PROSITE; PS50889; S4; 1.
PE   3: Inferred from homology;
KW   Endoplasmic reticulum {ECO:0000256|ARBA:ARBA00022824};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000284706};
KW   Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW   Ribosomal protein {ECO:0000256|ARBA:ARBA00022980};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW   ProRule:PRU00182};
KW   rRNA-binding {ECO:0000256|ARBA:ARBA00022730, ECO:0000256|PROSITE-
KW   ProRule:PRU00182};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        435..456
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          137..200
FT                   /note="RNA-binding S4"
FT                   /evidence="ECO:0000259|SMART:SM00363"
FT   REGION          196..302
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        245..278
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   514 AA;  58669 MW;  FB5F1322AA702CFA CRC64;
     MRHRNPLNLK RSLPCMSWSP KNLYNLWRRT VGPESTALRF KVTTDETLFQ QRWRSKAAVR
     AYHGEYIPEK VFKRWYLPDT LPDVRPRRRV FADDKNDLEE YAKRRTRAKE LERKQAEEIE
     QKGLAPVGSL MFLEVERRLD VFLFRCCFVH SVYEARRLII HGYVKLNGKK HSKANTRLAP
     GDMVSVDPDA IRFLKPPHGP IDHIVKPGSS DVEDRPAAPI ETAEESDSNS PSALEAEAAE
     VLASSGAESP TTEASFPEAE VSSSSETEIS TLLAKPTAED TKPTTEEANP GTEEAGIETV
     PSSKKELTPF HLPQYASPWL FIPAYIEVNF KTCSAIYVRN PTARPGYSEI PTPYDADGAV
     IRYAWEWPHA SSAFSTFLSS TIMSAAATLV HLPRPRPDHG FTKPPSSKLG IFFWRCRMWF
     ESTFVLSMLE PWEKVLLLTV LGFLFTLLFS GVFMYLPHHL KFLQQRAVYY LWGQEGDERL
     LWQWLGSPHP FGDFMSSLNS RDMNRPPFDD MLYS
//
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