ID A0A409YDX9_9AGAR Unreviewed; 514 AA.
AC A0A409YDX9;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 08-NOV-2023, entry version 16.
DE RecName: Full=RNA-binding S4 domain-containing protein {ECO:0000259|SMART:SM00363};
GN ORFNames=CVT26_016076 {ECO:0000313|EMBL:PPR01195.1};
OS Gymnopilus dilepis.
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC Agaricomycetidae; Agaricales; Agaricineae; Hymenogastraceae; Gymnopilus.
OX NCBI_TaxID=231916 {ECO:0000313|EMBL:PPR01195.1, ECO:0000313|Proteomes:UP000284706};
RN [1] {ECO:0000313|EMBL:PPR01195.1, ECO:0000313|Proteomes:UP000284706}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SRW20 {ECO:0000313|EMBL:PPR01195.1,
RC ECO:0000313|Proteomes:UP000284706};
RX PubMed=30283667; DOI=10.1002/evl3.42;
RA Reynolds H.T., Vijayakumar V., Gluck-Thaler E., Korotkin H.B.,
RA Matheny P.B., Slot J.C.;
RT "Horizontal gene cluster transfer increased hallucinogenic mushroom
RT diversity.";
RL Evol. Lett. 2:88-101(2018).
CC -!- SUBCELLULAR LOCATION: Endoplasmic reticulum membrane
CC {ECO:0000256|ARBA:ARBA00004477}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004477}. Membrane
CC {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS4 family.
CC {ECO:0000256|ARBA:ARBA00007465}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PPR01195.1}.
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DR EMBL; NHYE01000960; PPR01195.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A409YDX9; -.
DR STRING; 231916.A0A409YDX9; -.
DR InParanoid; A0A409YDX9; -.
DR OrthoDB; 1347927at2759; -.
DR Proteomes; UP000284706; Unassembled WGS sequence.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR CDD; cd00165; S4; 1.
DR Gene3D; 3.10.290.10; RNA-binding S4 domain; 1.
DR InterPro; IPR022801; Ribosomal_uS4.
DR InterPro; IPR018079; Ribosomal_uS4_CS.
DR InterPro; IPR002942; S4_RNA-bd.
DR InterPro; IPR036986; S4_RNA-bd_sf.
DR InterPro; IPR024512; Ser_palmitoyltrfase_ssu-like.
DR PANTHER; PTHR11831; 30S 40S RIBOSOMAL PROTEIN; 1.
DR PANTHER; PTHR11831:SF4; 37S RIBOSOMAL PROTEIN NAM9, MITOCHONDRIAL; 1.
DR Pfam; PF01479; S4; 1.
DR Pfam; PF11779; SPT_ssu-like; 1.
DR SMART; SM00363; S4; 1.
DR SUPFAM; SSF55174; Alpha-L RNA-binding motif; 1.
DR PROSITE; PS00632; RIBOSOMAL_S4; 1.
DR PROSITE; PS50889; S4; 1.
PE 3: Inferred from homology;
KW Endoplasmic reticulum {ECO:0000256|ARBA:ARBA00022824};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000284706};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00182};
KW rRNA-binding {ECO:0000256|ARBA:ARBA00022730, ECO:0000256|PROSITE-
KW ProRule:PRU00182};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 435..456
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 137..200
FT /note="RNA-binding S4"
FT /evidence="ECO:0000259|SMART:SM00363"
FT REGION 196..302
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 245..278
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 514 AA; 58669 MW; FB5F1322AA702CFA CRC64;
MRHRNPLNLK RSLPCMSWSP KNLYNLWRRT VGPESTALRF KVTTDETLFQ QRWRSKAAVR
AYHGEYIPEK VFKRWYLPDT LPDVRPRRRV FADDKNDLEE YAKRRTRAKE LERKQAEEIE
QKGLAPVGSL MFLEVERRLD VFLFRCCFVH SVYEARRLII HGYVKLNGKK HSKANTRLAP
GDMVSVDPDA IRFLKPPHGP IDHIVKPGSS DVEDRPAAPI ETAEESDSNS PSALEAEAAE
VLASSGAESP TTEASFPEAE VSSSSETEIS TLLAKPTAED TKPTTEEANP GTEEAGIETV
PSSKKELTPF HLPQYASPWL FIPAYIEVNF KTCSAIYVRN PTARPGYSEI PTPYDADGAV
IRYAWEWPHA SSAFSTFLSS TIMSAAATLV HLPRPRPDHG FTKPPSSKLG IFFWRCRMWF
ESTFVLSMLE PWEKVLLLTV LGFLFTLLFS GVFMYLPHHL KFLQQRAVYY LWGQEGDERL
LWQWLGSPHP FGDFMSSLNS RDMNRPPFDD MLYS
//