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Database: UniProt
Entry: A0A411YHU6_9ACTN
LinkDB: A0A411YHU6_9ACTN
Original site: A0A411YHU6_9ACTN 
ID   A0A411YHU6_9ACTN        Unreviewed;       625 AA.
AC   A0A411YHU6;
DT   08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT   08-MAY-2019, sequence version 1.
DT   24-JAN-2024, entry version 17.
DE   RecName: Full=Probable endolytic peptidoglycan transglycosylase RlpA {ECO:0000256|HAMAP-Rule:MF_02071};
DE            EC=4.2.2.- {ECO:0000256|HAMAP-Rule:MF_02071};
GN   Name=rlpA {ECO:0000256|HAMAP-Rule:MF_02071};
GN   ORFNames=ER308_14710 {ECO:0000313|EMBL:QBI20686.1};
OS   Egibacter rhizosphaerae.
OC   Bacteria; Actinomycetota; Nitriliruptoria; Egibacterales; Egibacteraceae;
OC   Egibacter.
OX   NCBI_TaxID=1670831 {ECO:0000313|EMBL:QBI20686.1, ECO:0000313|Proteomes:UP000291469};
RN   [1] {ECO:0000313|EMBL:QBI20686.1, ECO:0000313|Proteomes:UP000291469}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=EGI 80759 {ECO:0000313|EMBL:QBI20686.1,
RC   ECO:0000313|Proteomes:UP000291469};
RA   Chen D.-D., Tian Y., Jiao J.-Y., Zhang X.-T., Zhang Y.-G., Zhang Y.,
RA   Xiao M., Shu W.-S., Li W.-J.;
RT   "Egibacter rhizosphaerae EGI 80759T.";
RL   Submitted (JAN-2019) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Lytic transglycosylase with a strong preference for naked
CC       glycan strands that lack stem peptides. {ECO:0000256|HAMAP-
CC       Rule:MF_02071}.
CC   -!- SIMILARITY: Belongs to the RlpA family. {ECO:0000256|HAMAP-
CC       Rule:MF_02071, ECO:0000256|RuleBase:RU003495}.
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DR   EMBL; CP036402; QBI20686.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A411YHU6; -.
DR   KEGG; erz:ER308_14710; -.
DR   OrthoDB; 9813435at2; -.
DR   Proteomes; UP000291469; Chromosome.
DR   GO; GO:0008932; F:lytic endotransglycosylase activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR   GO; GO:0000270; P:peptidoglycan metabolic process; IEA:UniProtKB-UniRule.
DR   CDD; cd22268; DPBB_RlpA-like; 1.
DR   Gene3D; 3.40.50.12090; -; 1.
DR   Gene3D; 2.40.40.10; RlpA-like domain; 1.
DR   HAMAP; MF_02071; RlpA; 1.
DR   InterPro; IPR007253; Cell_wall-bd_2.
DR   InterPro; IPR034718; RlpA.
DR   InterPro; IPR009009; RlpA-like_DPBB.
DR   InterPro; IPR036908; RlpA-like_sf.
DR   InterPro; IPR012997; RplA.
DR   NCBIfam; TIGR00413; rlpA; 1.
DR   PANTHER; PTHR34183; -; 1.
DR   PANTHER; PTHR34183:SF1; ENDOLYTIC PEPTIDOGLYCAN TRANSGLYCOSYLASE RLPA; 1.
DR   Pfam; PF04122; CW_binding_2; 2.
DR   Pfam; PF03330; DPBB_1; 1.
DR   SUPFAM; SSF50685; Barwin-like endoglucanases; 1.
PE   3: Inferred from homology;
KW   Cell wall biogenesis/degradation {ECO:0000256|ARBA:ARBA00023316,
KW   ECO:0000256|HAMAP-Rule:MF_02071};
KW   Lyase {ECO:0000256|ARBA:ARBA00023239, ECO:0000256|HAMAP-Rule:MF_02071};
KW   Reference proteome {ECO:0000313|Proteomes:UP000291469}.
FT   DOMAIN          528..618
FT                   /note="RlpA-like protein double-psi beta-barrel"
FT                   /evidence="ECO:0000259|Pfam:PF03330"
FT   REGION          1..65
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          91..153
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          490..522
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        127..143
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        499..522
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   625 AA;  64636 MW;  96E632F718024129 CRC64;
     MRCGPASRGR RPTCAASTRT RAPRTVAESG RTVASPGPVV RRPTPVGARR APVAHCGGRS
     PTRGRVAVAQ GEVSGGTSGA IAATGSLGTI RVPSAGRVPS SRSTHRAGRT RRVRGHEGSL
     PRRDAAPPTT TPDPTPDPHT PPHKASPMTL SRTQLLRRVT TRAAVIAAGA LMVPVAATPV
     LADDEDEVVR LAAGNDRIET AIETSKAAGD DAREALLVHE DGYPDALAAG SVAGELDAPL
     LYTDGAGLDP RVADELDRLG TERVWVFGGP AAIDETVTDA LADADLEVER IDGDTRVGTA
     AAAATELHDE IDTATLALGF SADDRPGWPD AGAAATFAGA GATPTLLSRH DSVPQVTLDA
     LDELDVERVQ LIGGQHVLAD GVSDELERAG FDVERHSGET RAATAARVAD RVLDGAAEDA
     EFTAVLVDGR AQPDVFLAGG LAARIGGTVL FSGRDQLSSH AEEALRRDRV TGATVVGGGL
     HSWVVDSASA AASGDDLPEP PDELVEEEPA EAEEEAEPEG PEVVDVVEGE ASWYGDRFAG
     RPTASGEPYD PNALTAAMPP GTVAFGTWVR VTYLATDRSV EVRINDRGPY AGNRVIDLSR
     AAADTIGLRS AGTGQVRIEV LDGAP
//
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