ID   A0A415ELM3_9FIRM        Unreviewed;       609 AA.
AC   A0A415ELM3;
DT   08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT   08-MAY-2019, sequence version 1.
DT   27-MAR-2024, entry version 22.
DE   RecName: Full=Sigma-54 factor interaction domain-containing protein {ECO:0000259|PROSITE:PS50045};
GN   ORFNames=DW089_02330 {ECO:0000313|EMBL:RHK02828.1};
OS   Acidaminococcus sp. AM05-11.
OC   Bacteria; Bacillota; Negativicutes; Acidaminococcales; Acidaminococcaceae;
OC   Acidaminococcus.
OX   NCBI_TaxID=2291997 {ECO:0000313|EMBL:RHK02828.1, ECO:0000313|Proteomes:UP000285880};
RN   [1] {ECO:0000313|EMBL:RHK02828.1, ECO:0000313|Proteomes:UP000285880}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=AM05-11 {ECO:0000313|EMBL:RHK02828.1,
RC   ECO:0000313|Proteomes:UP000285880};
RA   Zou Y., Xue W., Luo G.;
RT   "A genome reference for cultivated species of the human gut microbiota.";
RL   Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:RHK02828.1}.
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DR   EMBL; QRMX01000003; RHK02828.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A415ELM3; -.
DR   Proteomes; UP000285880; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0000156; F:phosphorelay response regulator activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   Gene3D; 1.10.8.60; -; 1.
DR   Gene3D; 3.40.50.2300; -; 1.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   Gene3D; 3.40.50.10660; PrpR receptor domain-like; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR002197; HTH_Fis.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR010524; Sig_transdc_resp-reg_PrpR_N.
DR   InterPro; IPR002078; Sigma_54_int.
DR   PANTHER; PTHR32071:SF21; PROPIONATE CATABOLISM OPERON REGULATORY PROTEIN; 1.
DR   PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR   Pfam; PF02954; HTH_8; 1.
DR   Pfam; PF06506; PrpR_N; 1.
DR   PRINTS; PR01590; HTHFIS.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   SUPFAM; SSF159800; PrpR receptor domain-like; 1.
DR   PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          340..529
FT                   /note="Sigma-54 factor interaction"
FT                   /evidence="ECO:0000259|PROSITE:PS50045"
SQ   SEQUENCE   609 AA;  69949 MW;  D74B317B1C31EFBC CRC64;
     MLVYMLHYET GGIPMNHKIQ LLAIAPYEAL KHVILETAKE FPQLQVTVEV GTIYEGVEKL
     KQHHLENYDA VLSRGGTKME VEKNTTLPVF GIPISYYDLL HIIKLVEHYQ GKAAILSYEN
     IANSARVLCD VLQLHFDIYN IDQWHNAAEK VTQLKEMGYT LIIGDAVSVE YAEKLGMQNV
     LLTSGRESVR EALTQVTQVT TYLRRATAEN TLFHAGLSRQ GVHLLCYDET GELLYDDLPK
     NLHKLQTFCR RLLPAIRTEG DKTVYRKLPE GFFEIRAQRH HYRNAPYSLF FIQPQRFFTQ
     SGTPPYLTFY EASSGHSEQR GLPNFLQIVS PTAWTQALEM AKSVQPLCIT GAPGTEGDIF
     CQQLYEKSGR TQTPLLQLDC RLLHQEDILH FCTDPHSPLF LEQGSLCFRN LEGLAPELFT
     LLVDELAAAR YSATGRLYFQ LTGSPEDPLL QERLTVLRET FRVFHIPLPS LAHKEDKILN
     YALLYLQHHN HLYDTKLVGM DPEAVTLLCQ YSWPQNTSQL RQVLRRAIVL STETPWIRAH
     TIRQLLRHEE EIFRPSLRQP LPLHQTLDQL IQAVVQKTLE EENMNQSAAA RRLGISRTTL
     WRLLKKKKE
//