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Entry: A0A417YN84_9BACI
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ID   A0A417YN84_9BACI        Unreviewed;       307 AA.
AC   A0A417YN84;
DT   08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT   08-MAY-2019, sequence version 1.
DT   27-MAR-2024, entry version 14.
DE   RecName: Full=HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249};
DE            Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};
DE            EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249};
DE            EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249};
DE   AltName: Full=HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249};
GN   Name=hprK {ECO:0000256|HAMAP-Rule:MF_01249};
GN   ORFNames=D1B32_00630 {ECO:0000313|EMBL:RHW35159.1};
OS   Oceanobacillus profundus.
OC   Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Oceanobacillus.
OX   NCBI_TaxID=372463 {ECO:0000313|EMBL:RHW35159.1, ECO:0000313|Proteomes:UP000285456};
RN   [1] {ECO:0000313|EMBL:RHW35159.1, ECO:0000313|Proteomes:UP000285456}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 18246 {ECO:0000313|EMBL:RHW35159.1,
RC   ECO:0000313|Proteomes:UP000285456};
RX   PubMed=17267988; DOI=10.1099/ijs.0.64375-0;
RA   Kim Y.G., Choi D.H., Hyun S., Cho B.C.;
RT   "Oceanobacillus profundus sp. nov., isolated from a deep-sea sediment
RT   core.";
RL   Int. J. Syst. Evol. Microbiol. 57:409-413(2007).
CC   -!- FUNCTION: Catalyzes the ATP- as well as the pyrophosphate-dependent
CC       phosphorylation of a specific serine residue in HPr, a phosphocarrier
CC       protein of the phosphoenolpyruvate-dependent sugar phosphotransferase
CC       system (PTS). HprK/P also catalyzes the pyrophosphate-producing,
CC       inorganic phosphate-dependent dephosphorylation (phosphorolysis) of
CC       seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities
CC       of HprK/P are regulated by several intracellular metabolites, which
CC       change their concentration in response to the absence or presence of
CC       rapidly metabolisable carbon sources (glucose, fructose, etc.) in the
CC       growth medium. Also phosphorylates/dephosphorylates the HPr-like
CC       catabolite repression protein crh on a specific serine residue.
CC       Therefore, by controlling the phosphorylation state of HPr and crh,
CC       HPrK/P is a sensor enzyme that plays a major role in the regulation of
CC       carbon metabolism and sugar transport: it mediates carbon catabolite
CC       repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and
CC       inducer exclusion. {ECO:0000256|HAMAP-Rule:MF_01249}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=[HPr protein]-L-serine + ATP = [HPr protein]-O-phospho-L-
CC         serine + ADP + H(+); Xref=Rhea:RHEA:46600, Rhea:RHEA-COMP:11602,
CC         Rhea:RHEA-COMP:11603, ChEBI:CHEBI:15378, ChEBI:CHEBI:29999,
CC         ChEBI:CHEBI:30616, ChEBI:CHEBI:83421, ChEBI:CHEBI:456216;
CC         Evidence={ECO:0000256|ARBA:ARBA00001120, ECO:0000256|HAMAP-
CC         Rule:MF_01249};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=[HPr protein]-O-phospho-L-serine + H(+) + phosphate = [HPr
CC         protein]-L-serine + diphosphate; Xref=Rhea:RHEA:46604, Rhea:RHEA-
CC         COMP:11602, Rhea:RHEA-COMP:11603, ChEBI:CHEBI:15378,
CC         ChEBI:CHEBI:29999, ChEBI:CHEBI:33019, ChEBI:CHEBI:43474,
CC         ChEBI:CHEBI:83421; Evidence={ECO:0000256|ARBA:ARBA00001319,
CC         ECO:0000256|HAMAP-Rule:MF_01249};
CC   -!- COFACTOR:
CC       Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC         Evidence={ECO:0000256|HAMAP-Rule:MF_01249};
CC   -!- SUBUNIT: Homohexamer. {ECO:0000256|HAMAP-Rule:MF_01249}.
CC   -!- DOMAIN: The Walker A ATP-binding motif also binds Pi and PPi.
CC       {ECO:0000256|HAMAP-Rule:MF_01249}.
CC   -!- MISCELLANEOUS: Both phosphorylation and phosphorolysis are carried out
CC       by the same active site and suggest a common mechanism for both
CC       reactions. {ECO:0000256|HAMAP-Rule:MF_01249}.
CC   -!- SIMILARITY: Belongs to the HPrK/P family.
CC       {ECO:0000256|ARBA:ARBA00006883, ECO:0000256|HAMAP-Rule:MF_01249}.
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC       feature annotation. {ECO:0000256|HAMAP-Rule:MF_01249}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:RHW35159.1}.
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DR   EMBL; QWEH01000001; RHW35159.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A417YN84; -.
DR   OrthoDB; 9778803at2; -.
DR   Proteomes; UP000285456; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0000287; F:magnesium ion binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0000155; F:phosphorelay sensor kinase activity; IEA:InterPro.
DR   GO; GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
DR   GO; GO:0004712; F:protein serine/threonine/tyrosine kinase activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0005975; P:carbohydrate metabolic process; IEA:UniProtKB-KW.
DR   GO; GO:0006109; P:regulation of carbohydrate metabolic process; IEA:UniProtKB-UniRule.
DR   CDD; cd01918; HprK_C; 1.
DR   Gene3D; 3.40.1390.20; HprK N-terminal domain-like; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   HAMAP; MF_01249; HPr_kinase; 1.
DR   InterPro; IPR003755; HPr(Ser)_kin/Pase.
DR   InterPro; IPR011104; Hpr_kin/Pase_C.
DR   InterPro; IPR011126; Hpr_kin/Pase_Hpr_N.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR028979; Ser_kin/Pase_Hpr-like_N_sf.
DR   NCBIfam; TIGR00679; hpr-ser; 1.
DR   PANTHER; PTHR30305:SF1; HPR KINASE_PHOSPHORYLASE; 1.
DR   PANTHER; PTHR30305; UNCHARACTERIZED; 1.
DR   Pfam; PF07475; Hpr_kinase_C; 1.
DR   Pfam; PF02603; Hpr_kinase_N; 1.
DR   SUPFAM; SSF75138; HprK N-terminal domain-like; 1.
DR   SUPFAM; SSF53795; PEP carboxykinase-like; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|HAMAP-
KW   Rule:MF_01249};
KW   Carbohydrate metabolism {ECO:0000256|ARBA:ARBA00023277, ECO:0000256|HAMAP-
KW   Rule:MF_01249};
KW   Kinase {ECO:0000256|ARBA:ARBA00022777, ECO:0000256|HAMAP-Rule:MF_01249};
KW   Magnesium {ECO:0000256|HAMAP-Rule:MF_01249};
KW   Metal-binding {ECO:0000256|HAMAP-Rule:MF_01249};
KW   Multifunctional enzyme {ECO:0000256|ARBA:ARBA00023268, ECO:0000256|HAMAP-
KW   Rule:MF_01249};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741, ECO:0000256|HAMAP-
KW   Rule:MF_01249}; Reference proteome {ECO:0000313|Proteomes:UP000285456};
KW   Serine/threonine-protein kinase {ECO:0000256|ARBA:ARBA00022527,
KW   ECO:0000256|HAMAP-Rule:MF_01249};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|HAMAP-
KW   Rule:MF_01249}.
FT   DOMAIN          4..127
FT                   /note="HPr(Ser) kinase/phosphorylase N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF02603"
FT   DOMAIN          130..298
FT                   /note="HPr kinase/phosphorylase C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF07475"
FT   REGION          201..210
FT                   /note="Important for the catalytic mechanism of both
FT                   phosphorylation and dephosphorylation"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_01249"
FT   REGION          264..269
FT                   /note="Important for the catalytic mechanism of
FT                   dephosphorylation"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_01249"
FT   ACT_SITE        138
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_01249"
FT   ACT_SITE        159
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_01249"
FT   ACT_SITE        177
FT                   /note="Proton acceptor; for phosphorylation activity.
FT                   Proton donor; for dephosphorylation activity"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_01249"
FT   BINDING         153..160
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_01249"
FT   BINDING         160
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_01249"
SQ   SEQUENCE   307 AA;  34889 MW;  1E76958C3B76FA31 CRC64;
     MKSIMVEQLV REFSLEVLAG ENELNRSITR LRTHRPGLEF IGYFDFFPME RVQILGQKEI
     TYLHQLSDSE RQLRIGNVVN YHPPCFIVTA GQGGLTYLKQ YCTKEKIPLL RTKESTTDFI
     AKMDAYLTKS LAPEMALHGV CLNVFGIGIL LRGESGVGKS ETAHTLIGRG HRLVADDIVV
     LKKLSHKTIL GTHDENNKEF LALRSVGLLN VVRVYGRKSF QEETRIALDI ELTRWKENAL
     NNELELETRF TDYMGVPIPH IQIQLQPGRD VAGLIEAAAN NWYLKQQGYS AAEDFMNRIE
     NDNGNNR
//
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