ID A0A418W7Z4_9SPHN Unreviewed; 526 AA.
AC A0A418W7Z4;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 27-MAR-2024, entry version 15.
DE SubName: Full=Ribonuclease J {ECO:0000313|EMBL:RJF86121.1};
GN ORFNames=D3876_15320 {ECO:0000313|EMBL:RJF86121.1};
OS Sphingomonas cavernae.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingomonas.
OX NCBI_TaxID=2320861 {ECO:0000313|EMBL:RJF86121.1, ECO:0000313|Proteomes:UP000286100};
RN [1] {ECO:0000313|EMBL:RJF86121.1, ECO:0000313|Proteomes:UP000286100}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K2R01-6 {ECO:0000313|EMBL:RJF86121.1,
RC ECO:0000313|Proteomes:UP000286100};
RA Zhu H.;
RL Submitted (SEP-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RJF86121.1}.
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DR EMBL; QYUM01000004; RJF86121.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A418W7Z4; -.
DR OrthoDB; 9770211at2; -.
DR Proteomes; UP000286100; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd07714; RNaseJ_MBL-fold; 1.
DR Gene3D; 3.10.20.580; -; 1.
DR Gene3D; 3.40.50.10710; Metallo-hydrolase/oxidoreductase; 1.
DR Gene3D; 3.60.15.10; Ribonuclease Z/Hydroxyacylglutathione hydrolase-like; 1.
DR InterPro; IPR002328; ADH_Zn_CS.
DR InterPro; IPR001279; Metallo-B-lactamas.
DR InterPro; IPR036866; RibonucZ/Hydroxyglut_hydro.
DR InterPro; IPR011108; RMMBL.
DR InterPro; IPR042173; RNase_J_2.
DR InterPro; IPR041636; RNase_J_C.
DR PANTHER; PTHR43694; RIBONUCLEASE J; 1.
DR PANTHER; PTHR43694:SF1; RIBONUCLEASE J; 1.
DR Pfam; PF00753; Lactamase_B; 1.
DR Pfam; PF07521; RMMBL; 1.
DR Pfam; PF17770; RNase_J_C; 1.
DR SMART; SM00849; Lactamase_B; 1.
DR SUPFAM; SSF56281; Metallo-hydrolase/oxidoreductase; 1.
DR PROSITE; PS00059; ADH_ZINC; 1.
PE 4: Predicted;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000286100};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 1..195
FT /note="Metallo-beta-lactamase"
FT /evidence="ECO:0000259|SMART:SM00849"
SQ SEQUENCE 526 AA; 56643 MW; BA7F966063F3528A CRC64;
MNVNLYGTQG KWVMVDCGIT FADPAYPGVD IILPDLAFIE ERAEDLLGIV LTHGHEDHIG
ALPYLAADLG VPLYATPFTA GLIQGKLDEE GIADQVELNI VDNEGSFSLG PFGFRYVPLA
HSIPEGNAVL IDTPYGRIFH TGDWKLDDAP QLGAPSTPEE LTEIGDEGIL ALVCDSTNVF
NPEASGSEGA VRAGLDEVIG GAKGRVLVTT FASNAARLRT LGQVAKDTGR TLCVAGRSLD
RILRVAKATG YLKDFPEVVD FDTAMGLPRR DVMIVATGGQ GEPRAALARV AEGTHQIKLD
AGDLVVFSSK QIPGNEIAIG RIQNTLAAAG VEMITDRQAH VHVSGHPGRP ELASMYHWIR
PQILIPVHGE MRHMVEQARF GLEQGVQKAI VQQNGELIRL APNGPVKLGH ERVGRLVLDG
DVILPADGTT MNDRRKLSLH GQISVAVALD NQNRLRGDPA IRLNGVPVEE DRDAFLEDAC
KAAEQAVAKG ARDEDSLREA LRLAVRRRAT HWTGKKPVVD VLIVRC
//
