ID A0A421GT27_9STRA Unreviewed; 297 AA.
AC A0A421GT27;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 27-MAR-2024, entry version 14.
DE RecName: Full=DNA-directed RNA polymerase III subunit RPC6 {ECO:0000256|PIRNR:PIRNR028763};
DE Short=RNA polymerase III subunit C6 {ECO:0000256|PIRNR:PIRNR028763};
GN ORFNames=BBI17_003772 {ECO:0000313|EMBL:RLM96189.1}, BBO99_00003743
GN {ECO:0000313|EMBL:RLN81394.1}, JM16_007451
GN {ECO:0000313|EMBL:KAG2517341.1};
OS Phytophthora kernoviae.
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC Phytophthora.
OX NCBI_TaxID=325452 {ECO:0000313|EMBL:RLN81394.1, ECO:0000313|Proteomes:UP000285624};
RN [1] {ECO:0000313|EMBL:KAG2517341.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=NZFS 2646 {ECO:0000313|EMBL:KAG2517341.1};
RX PubMed=26981359;
RA Studholme D.J., McDougal R.L., Sambles C., Hansen E., Hardy G., Grant M.,
RA Ganley R.J., Williams N.M.;
RT "Genome sequences of six Phytophthora species associated with forests in
RT New Zealand.";
RL Genom Data 7:54-56(2015).
RN [2] {ECO:0000313|Proteomes:UP000285624, ECO:0000313|Proteomes:UP000285883}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Chile2 {ECO:0000313|EMBL:RLM96189.1}, and Chile4
RC {ECO:0000313|EMBL:RLN81394.1};
RA Studholme D.J., Sanfuentes E., Panda P., Hill R., Sambles C., Grant M.,
RA Williams N.M., Mcdougal R.L.;
RT "Genome sequencing of oomycete isolates from Chile give support for New
RT Zealand origin for Phytophthora kernoviae and make available the first
RT Nothophytophthora sp. genome.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:KAG2517341.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=NZFS 2646 {ECO:0000313|EMBL:KAG2517341.1};
RA Studholme D.J.;
RL Submitted (JUN-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC Specific peripheric component of RNA polymerase III which synthesizes
CC small RNAs, such as 5S rRNA and tRNAs. {ECO:0000256|PIRNR:PIRNR028763}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PIRNR:PIRNR028763}.
CC -!- SIMILARITY: Belongs to the eukaryotic RPC34/RPC39 RNA polymerase
CC subunit family. {ECO:0000256|ARBA:ARBA00011038,
CC ECO:0000256|PIRNR:PIRNR028763}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RLN81394.1}.
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DR EMBL; JPWV03000316; KAG2517341.1; -; Genomic_DNA.
DR EMBL; MAYM02002329; RLM96189.1; -; Genomic_DNA.
DR EMBL; MBDN02000080; RLN81394.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A421GT27; -.
DR STRING; 325452.A0A421GT27; -.
DR Proteomes; UP000285624; Unassembled WGS sequence.
DR Proteomes; UP000285883; Unassembled WGS sequence.
DR Proteomes; UP000785171; Unassembled WGS sequence.
DR GO; GO:0005666; C:RNA polymerase III complex; IEA:UniProtKB-UniRule.
DR GO; GO:0006383; P:transcription by RNA polymerase III; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR007832; RNA_pol_Rpc34.
DR InterPro; IPR016049; RNA_pol_Rpc34-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR12780:SF1; DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC6; 1.
DR PANTHER; PTHR12780; RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED; 1.
DR Pfam; PF05158; RNA_pol_Rpc34; 2.
DR PIRSF; PIRSF028763; RNA_pol_Rpc34; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase {ECO:0000256|PIRNR:PIRNR028763};
KW Nucleus {ECO:0000256|PIRNR:PIRNR028763};
KW Reference proteome {ECO:0000313|Proteomes:UP000285624};
KW Transcription {ECO:0000256|ARBA:ARBA00023163,
KW ECO:0000256|PIRNR:PIRNR028763}.
SQ SEQUENCE 297 AA; 33335 MW; E2FDC5D068C33E45 CRC64;
MASATSKTAP SVMNKFLGLL RNFRDPVTDA EVRDYFQSDG NNGYEQLPDV INALLGEGKI
KIFKKGSVLS YGLVGAEEAE RIRGLTLEQR LVLQEIERAG NKGIWTRDIK THTNIPQQIV
TKTLRLLETR HLVKSVKSIS SKNKKLYMLF DLVPSTEITG GPWYNEQEFD HVFIDTLSTF
VYEVIKASGM STLTAITDKV HASGISKVAL GPEEIRSIIQ TLMYDGRVEE VRSVRLTPGS
SHEVKYKVSQ QITTFNYLSE TPCGVCPVFD QCQEGNVISP RSCLYMTKWL GLKELDF
//
