ID A0A427XQ08_9TREE Unreviewed; 1069 AA.
AC A0A427XQ08;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 24-JAN-2024, entry version 14.
DE RecName: Full=RNA polymerase II assembly factor Rtp1 C-terminal domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=EHS24_008326 {ECO:0000313|EMBL:RSH80898.1};
OS Apiotrichum porosum.
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes;
OC Trichosporonales; Trichosporonaceae; Apiotrichum.
OX NCBI_TaxID=105984 {ECO:0000313|EMBL:RSH80898.1, ECO:0000313|Proteomes:UP000279236};
RN [1] {ECO:0000313|EMBL:RSH80898.1, ECO:0000313|Proteomes:UP000279236}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 27194 {ECO:0000313|EMBL:RSH80898.1,
RC ECO:0000313|Proteomes:UP000279236};
RA Aliyu H., Gorte O., Ochsenreither K.;
RT "Genome sequence of Apiotrichum porosum DSM 27194.";
RL Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the Tango6 family.
CC {ECO:0000256|ARBA:ARBA00005724}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RSH80898.1}.
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DR EMBL; RSCE01000007; RSH80898.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A427XQ08; -.
DR OrthoDB; 1424255at2759; -.
DR Proteomes; UP000279236; Unassembled WGS sequence.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR021133; HEAT_type_2.
DR InterPro; IPR019451; Rtp1_C1.
DR InterPro; IPR019414; Rtp1_C2.
DR InterPro; IPR039600; TANGO6/Rtp1.
DR PANTHER; PTHR20959; TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 FAMILY MEMBER; 1.
DR PANTHER; PTHR20959:SF1; TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 HOMOLOG; 1.
DR Pfam; PF10363; RTP1_C1; 1.
DR Pfam; PF10304; RTP1_C2; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR PROSITE; PS50077; HEAT_REPEAT; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000279236}.
FT DOMAIN 729..839
FT /note="RNA polymerase II assembly factor Rtp1 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF10363"
FT REPEAT 768..806
FT /note="HEAT"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00103"
FT DOMAIN 1026..1049
FT /note="RNA polymerase II assembly factor Rtp1 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF10304"
FT REGION 930..959
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 939..958
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1069 AA; 116166 MW; D24BD3D6C7AB2157 CRC64;
MADTSIRDIL DTGYTLLQPP APLPSAPPLL LERLRHSAQH VSWRDKPAWN EDDELDVIAL
DDDSSNPARV KKRRDELVLV VGKRSIDLVV ALQWWLSKEF WPVNLREGLN EKDFLLGTAD
LRLVRLLLSH SMASGVLPLI TAYIGGLRQR APVDPSLLSA LSSLVGLIET PLPAATSSER
NPIPPTTITQ TVVAAHLPLL ILAAVTLAWT PTARPETYAA LRQQLISSLN SLSPTQAMAS
LGTSLKIVQA SKKAGKTTPT RSQIIWPGYV AGAVSTLMSA QVQRSGGVKA VMENVFGEAG
NMAGPEAVEG QKLDQVAELL ARVPKNVPEQ MYIPGLLNTL MDLVAPESGN HPIVYTHAAA
YVIHHLWSTS SLAVEWLNGR LHPLWLPVNP AQGVVVPASA VSAAARTMAL LVLHAPPSPL
FVDFVVRPII LPLFALYASL TPKIQAKSIE KRSESAPGLV DDARLLLTSW GKVVPKDEGV
EGIWSVVTGG KGWPASPEGL QVQWRKGADG VELVNDYPMV EHQEISATME DDEAMLDQFD
LSPDPPTLSQ LLKDFDQPEI SSEVFLKVLD EWRVRANAAD QDPLSSLLFL RLTLAMMETL
GEKLLSNPDH VLNFVEGVLN DEVQTIAAKK HSLADGVASM KLVEEVDEDI NIDEPLPELT
PEGIEKMGML NHTTTAILHP INDHLETLSS AGPTNVRQLA REALLVLLVR RSASLTSEDG
QVSHAVATYR RALTLVQDPI LPVRAHGLVL LRDLVLSKEY EPALTPGIME VYMGSIQDKD
SYIYLNAVKG LAAMADALGK DIFRTLVRMY RTGNVELDNL DKRLRIGEAL GMVIRSAGKA
FVANAEFVVP ALLSMFPDTS LPTILRTSSL SLLSTCAEVD HLALLPWANE LTSAAIDLVQ
IESVVSSPFR PEAVKEEEPV APARPKIVLV DDDEPEEEVA KEQTPRIVDE EPTAQDSKHP
ALRRAAVVFL GLLTASLIEA ASPEQPPASD EFKLRLPNSS SQLQTRQSHA RCTVTLQTPV
LDRAANVLGY VAATDVDEVV RGQAGEVVAL VQRLKSVQQL SSLSSRQLL
//