ID   A0A430KQS3_9GAMM        Unreviewed;       407 AA.
AC   A0A430KQS3;
DT   08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT   08-MAY-2019, sequence version 1.
DT   24-JAN-2024, entry version 16.
DE   RecName: Full=L,D-transpeptidase catalytic domain-containing protein {ECO:0000259|Pfam:PF03734};
GN   ORFNames=EH243_09200 {ECO:0000313|EMBL:RTE65857.1};
OS   Amphritea opalescens.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales;
OC   Oceanospirillaceae; Amphritea.
OX   NCBI_TaxID=2490544 {ECO:0000313|EMBL:RTE65857.1, ECO:0000313|Proteomes:UP000283087};
RN   [1] {ECO:0000313|EMBL:RTE65857.1, ECO:0000313|Proteomes:UP000283087}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ANRC-JH13 {ECO:0000313|EMBL:RTE65857.1,
RC   ECO:0000313|Proteomes:UP000283087};
RA   Fang Z., Zhang Y., Han X.;
RT   "The draft genome sequence of Amphritea opalescens ANRC-JH13T.";
RL   Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.
CC       {ECO:0000256|ARBA:ARBA00004752}.
CC   -!- SIMILARITY: Belongs to the YkuD family.
CC       {ECO:0000256|ARBA:ARBA00005992}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:RTE65857.1}.
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DR   EMBL; RQXW01000007; RTE65857.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A430KQS3; -.
DR   OrthoDB; 9809748at2; -.
DR   UniPathway; UPA00219; -.
DR   Proteomes; UP000283087; Unassembled WGS sequence.
DR   GO; GO:0004180; F:carboxypeptidase activity; IEA:UniProt.
DR   GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR   GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-UniPathway.
DR   CDD; cd16913; YkuD_like; 1.
DR   Gene3D; 2.40.440.10; L,D-transpeptidase catalytic domain-like; 1.
DR   InterPro; IPR005490; LD_TPept_cat_dom.
DR   InterPro; IPR032710; NTF2-like_dom_sf.
DR   InterPro; IPR038063; Transpep_catalytic_dom.
DR   PANTHER; PTHR36699:SF1; L,D-TRANSPEPTIDASE YAFK-RELATED; 1.
DR   PANTHER; PTHR36699; LD-TRANSPEPTIDASE; 1.
DR   Pfam; PF03734; YkuD; 1.
DR   SUPFAM; SSF141523; L,D-transpeptidase catalytic domain-like; 1.
DR   SUPFAM; SSF54427; NTF2-like; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000283087};
KW   Signal {ECO:0000256|SAM:SignalP};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT   SIGNAL          1..31
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           32..407
FT                   /note="L,D-transpeptidase catalytic domain-containing
FT                   protein"
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5019028129"
FT   DOMAIN          141..275
FT                   /note="L,D-transpeptidase catalytic"
FT                   /evidence="ECO:0000259|Pfam:PF03734"
SQ   SEQUENCE   407 AA;  45807 MW;  E2548C35CBFB801D CRC64;
     MKNLPVIYLL KPLRRAVLVS ICGLLPLGLQ ADTDHLNMDQ ESLLLASLGD LQQNQMTGAM
     DKLRTLIKEQ PDFRLAQLIY ADLMAAQGGT LSAVGNNGQS DKKTLQGLIS EARARMSVDR
     YKPAPGTIPS SLLQMSPKQQ HVIVIDTSLS RLYLFKNNHG TPQLIKDYYV SYGRGGVDKR
     KRGDLKTPLG VYFTTGRLTD DQLPPRYGSG ALPINYPNAW DQRLGNTGSG IWVHGSPKDT
     FSRAPQASEG CLSLSNNHFT ELDQIVDFTD TPVLIGTHFD WIDPQSWQQK QKAFIEVVDS
     WRKDWESLDT DTYLSHYSEQ FNNGKMGFNR FAEHKRRVNG SKSFIDVGIH NLSIYQHPDN
     PNMFVATFTQ DYKSDNYSGS GLKRQYWVNE GGQWRIAYEG DPQKGKP
//