ID A0A432L9S7_9BACI Unreviewed; 480 AA.
AC A0A432L9S7;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE SubName: Full=PAS domain S-box protein {ECO:0000313|EMBL:RUL50362.1};
GN ORFNames=EK386_14140 {ECO:0000313|EMBL:RUL50362.1};
OS Lysinibacillus antri.
OC Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.
OX NCBI_TaxID=2498145 {ECO:0000313|EMBL:RUL50362.1, ECO:0000313|Proteomes:UP000287910};
RN [1] {ECO:0000313|EMBL:RUL50362.1, ECO:0000313|Proteomes:UP000287910}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SYSU K30002 {ECO:0000313|EMBL:RUL50362.1,
RC ECO:0000313|Proteomes:UP000287910};
RA Narsing Rao M.P., Zhang H., Dong Z.-Y., Niu X.-K., Zhang K., Fang B.-Z.,
RA Kang Y.-Q., Xiao M., Li W.-J.;
RT "Lysinibacillus antri sp. nov., isolated from a cave soil.";
RL Submitted (DEC-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RUL50362.1}.
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DR EMBL; RYYR01000021; RUL50362.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A432L9S7; -.
DR Proteomes; UP000287910; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR32071:SF74; TRANSCRIPTIONAL ACTIVATOR ROCR; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF13426; PAS_9; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 161..389
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 480 AA; 54640 MW; 8EE14FDB0B393456 CRC64;
MGGLLCQIIL RYDNGEVLNL LSKQAIALKL YEEIIERVGV GIHAVDHVGK TIIYNKKMRE
MEAMNEEDVL HKNVRDVFQF QENQSSTLLQ SLEHGEEVVN VKQTYFNNRG VEITTVNNTF
PLKIDGEICA AVEIATDVTK MERLVRRNLK QTKTEFTFSH IIGKSSELLE VISLAKRATR
TNSNVLIIGE TGTGKELFAQ SIHAESDRAN APFITQNCAA LPDSLIEAIL FGTTKGAFTG
AIDSPGLFEQ AGGGTLLLDE LNSLNITLQS KLLRVLQERK VRRIGGTKEF PIDVRVIATI
NEDPIDAIAN NRLRKDLYYR LAVVTLFIPP LRERITDIEI LVEDFIKKYN QLFNLNVQGI
SNEVLQFFEF HNWPGNVREL EHVIEASLNL INHESMIEFH HLPYQYRKNE TKKANVVPVF
SQPNNTENTT LADQLALFEK QYIQQLLQKN HYHITNTAKE LGISRQSLQY RMKRLNIKVN
//
