ID A0A432MG47_9BACT Unreviewed; 248 AA.
AC A0A432MG47;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 08-NOV-2023, entry version 15.
DE RecName: Full=Large ribosomal subunit protein uL4 {ECO:0000256|ARBA:ARBA00035244, ECO:0000256|HAMAP-Rule:MF_01328};
GN Name=rplD {ECO:0000256|HAMAP-Rule:MF_01328};
GN ORFNames=TsocGM_18735 {ECO:0000313|EMBL:RUL85412.1};
OS Tautonia sociabilis.
OC Bacteria; Planctomycetota; Planctomycetia; Isosphaerales; Isosphaeraceae;
OC Tautonia.
OX NCBI_TaxID=2080755 {ECO:0000313|EMBL:RUL85412.1, ECO:0000313|Proteomes:UP000280296};
RN [1] {ECO:0000313|EMBL:RUL85412.1, ECO:0000313|Proteomes:UP000280296}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GM2012 {ECO:0000313|EMBL:RUL85412.1,
RC ECO:0000313|Proteomes:UP000280296};
RA Toschakov S.V.;
RL Submitted (DEC-2018) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:RUL85412.1, ECO:0000313|Proteomes:UP000280296}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GM2012 {ECO:0000313|EMBL:RUL85412.1,
RC ECO:0000313|Proteomes:UP000280296};
RA Kovaleva O.L., Elcheninov A.G., Van Heerden E., Toshchakov S.V.,
RA Novikov A., Bonch-Osmolovskaya E.A., Kublanov I.V.;
RT "Tautonia sociabilis, a novel thermotolerant planctomycete of
RT Isosphaeraceae family, isolated from a 4000 m deep subterranean habitat.";
RL Submitted (JAN-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Forms part of the polypeptide exit tunnel.
CC {ECO:0000256|HAMAP-Rule:MF_01328}.
CC -!- FUNCTION: One of the primary rRNA binding proteins, this protein
CC initially binds near the 5'-end of the 23S rRNA. It is important during
CC the early stages of 50S assembly. It makes multiple contacts with
CC different domains of the 23S rRNA in the assembled 50S subunit and
CC ribosome. {ECO:0000256|HAMAP-Rule:MF_01328}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000256|HAMAP-
CC Rule:MF_01328}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL4 family.
CC {ECO:0000256|ARBA:ARBA00010528, ECO:0000256|HAMAP-Rule:MF_01328}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RUL85412.1}.
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DR EMBL; RYZH01000040; RUL85412.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A432MG47; -.
DR OrthoDB; 9803201at2; -.
DR Proteomes; UP000280296; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.1370.10; -; 1.
DR HAMAP; MF_01328_B; Ribosomal_L4_B; 1.
DR InterPro; IPR002136; Ribosomal_uL4.
DR InterPro; IPR013005; Ribosomal_uL4-like.
DR InterPro; IPR023574; Ribosomal_uL4_dom_sf.
DR NCBIfam; TIGR03953; rplD_bact; 1.
DR PANTHER; PTHR10746:SF6; 39S RIBOSOMAL PROTEIN L4, MITOCHONDRIAL; 1.
DR PANTHER; PTHR10746; 50S RIBOSOMAL PROTEIN L4; 1.
DR Pfam; PF00573; Ribosomal_L4; 1.
DR SUPFAM; SSF52166; Ribosomal protein L4; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000280296};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274, ECO:0000256|HAMAP-
KW Rule:MF_01328};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980, ECO:0000256|HAMAP-
KW Rule:MF_01328}; RNA-binding {ECO:0000256|HAMAP-Rule:MF_01328};
KW rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01328}.
SQ SEQUENCE 248 AA; 27338 MW; 4EFC88929A1A82A9 CRC64;
MLTIPVYNTS GEQVGEESID PADFGGAINK QLLHDVVLMH LANRRVGTVN TRGRSDVAGS
TKKMYRQKGT GNARMGAKRT NKRVGGGVAF ARRNRDYSYR LPKKAVRLAI RMAVLSKFQD
NQAIVLTGLD LGATPKTKEV ARVLRSIRRP DLPDTAQPVD GESKRDALRR TLDGRKVLLG
TAEHDPSVYK AARNIPGVKV APVAEFNTYD ILRQRYLILT PEALATLKER VKEKVRRRPE
VEAAAAAG
//
