ID A0A443NYQ0_9MAGN Unreviewed; 383 AA.
AC A0A443NYQ0;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE SubName: Full=Histone deacetylase 8 {ECO:0000313|EMBL:RWR83664.1};
GN ORFNames=CKAN_01242500 {ECO:0000313|EMBL:RWR83664.1};
OS Cinnamomum micranthum f. kanehirae.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Magnoliidae; Laurales; Lauraceae; Cinnamomum.
OX NCBI_TaxID=337451 {ECO:0000313|EMBL:RWR83664.1, ECO:0000313|Proteomes:UP000283530};
RN [1] {ECO:0000313|EMBL:RWR83664.1, ECO:0000313|Proteomes:UP000283530}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chaw 1501 {ECO:0000313|Proteomes:UP000283530};
RC TISSUE=Young leaves {ECO:0000313|EMBL:RWR83664.1};
RX PubMed=30626928; DOI=10.1038/s41477-018-0337-0;
RA Chaw S.M., Liu Y.C., Wu Y.W., Wang H.Y., Lin C.I., Wu C.S., Ke H.M.,
RA Chang L.Y., Hsu C.Y., Yang H.T., Sudianto E., Hsu M.H., Wu K.P., Wang L.N.,
RA Leebens-Mack J.H., Tsai I.J.;
RT "Stout camphor tree genome fills gaps in understanding of flowering plant
RT genome evolution.";
RL Nat. Plants 5:63-73(2019).
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|ARBA:ARBA00001947};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RWR83664.1}.
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DR EMBL; QPKB01000004; RWR83664.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A443NYQ0; -.
DR STRING; 337451.A0A443NYQ0; -.
DR Proteomes; UP000283530; Unassembled WGS sequence.
DR GO; GO:0004407; F:histone deacetylase activity; IEA:UniProtKB-EC.
DR CDD; cd09996; HDAC_classII_1; 1.
DR Gene3D; 3.40.800.20; Histone deacetylase domain; 1.
DR InterPro; IPR000286; His_deacetylse.
DR InterPro; IPR023801; His_deacetylse_dom.
DR InterPro; IPR037138; His_deacetylse_dom_sf.
DR InterPro; IPR023696; Ureohydrolase_dom_sf.
DR PANTHER; PTHR10625:SF9; HISTONE DEACETYLASE 8; 1.
DR PANTHER; PTHR10625; HISTONE DEACETYLASE HDAC1-RELATED; 1.
DR Pfam; PF00850; Hist_deacetyl; 1.
DR PRINTS; PR01270; HDASUPER.
DR SUPFAM; SSF52768; Arginase/deacetylase; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000283530}.
FT DOMAIN 47..338
FT /note="Histone deacetylase"
FT /evidence="ECO:0000259|Pfam:PF00850"
SQ SEQUENCE 383 AA; 41815 MW; A25B59E7F816156C CRC64;
MAHPSPSSSP SDQIHVFWHE GMLEHDQGIG VFDTASDPGF LEVLEKHPEN SDRVKNMVSI
LRKGPISPYI SWHQGTSALP SQLLSFHTSE YINQLLEADA TGGKTMCAGT ILNPGSWDCA
LLAAGTTLSA MKHILDGHGK MAYALVRPPG HHAQPTQADG YCFLNNAGLA VQLAIDSGCK
RVAVIDIDVH YGNGTAEGFY LSDRVLTISL HMNHGSWGPS HPQKGSVDEL GDDKGFGFNL
NIPLPNGSGD RGYEYAMTEL VVPAIEKFDP DIMVMVVGQD SSAFDPNGRQ CLTMEGYREI
GRMVRNMADM HCDGRLLVVQ EGGYHITYSA FCLHATLEGV LNLPVPLLSD PIAYYPEDEA
VTVKEVNFIK QYWKDTVPFL GEE
//
