ID A0A443RUG2_9ACAR Unreviewed; 284 AA.
AC A0A443RUG2;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 24-JAN-2024, entry version 15.
DE SubName: Full=Endogenous retrovirus group K member 5 Gag polyprotein-like protein {ECO:0000313|EMBL:RWS18818.1};
DE Flags: Fragment;
GN ORFNames=B4U80_12412 {ECO:0000313|EMBL:RWS18818.1};
OS Leptotrombidium deliense.
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari;
OC Acariformes; Trombidiformes; Prostigmata; Anystina; Parasitengona;
OC Trombiculoidea; Trombiculidae; Leptotrombidium.
OX NCBI_TaxID=299467 {ECO:0000313|EMBL:RWS18818.1, ECO:0000313|Proteomes:UP000288716};
RN [1] {ECO:0000313|EMBL:RWS18818.1, ECO:0000313|Proteomes:UP000288716}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=UoL-UT {ECO:0000313|EMBL:RWS18818.1};
RA Dong X., Chaisiri K., Xia D., Armstrong S.D., Fang Y., Donnelly M.J.,
RA Kadowaki T., McGarry J.W., Darby A.C., Makepeace B.L.;
RT "Genomes of trombidid mites reveal novel predicted allergens and laterally-
RT transferred genes associated with secondary metabolism.";
RL Gigascience 0:0-0(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RWS18818.1}.
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DR EMBL; NCKV01033715; RWS18818.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A443RUG2; -.
DR STRING; 299467.A0A443RUG2; -.
DR EnsemblMetazoa; LDEU013222-RA; LDEU013222-PA; LDEU013222.
DR VEuPathDB; VectorBase:LDEU013222; -.
DR Proteomes; UP000288716; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0016032; P:viral process; IEA:InterPro.
DR Gene3D; 1.10.1200.30; -; 1.
DR Gene3D; 1.10.375.10; Human Immunodeficiency Virus Type 1 Capsid Protein; 1.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR InterPro; IPR045345; Gag_p24_C.
DR InterPro; IPR008916; Retrov_capsid_C.
DR InterPro; IPR008919; Retrov_capsid_N.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR40389; ENDOGENOUS RETROVIRUS GROUP K MEMBER 24 GAG POLYPROTEIN-RELATED; 1.
DR PANTHER; PTHR40389:SF3; IGE-BINDING PROTEIN; 1.
DR Pfam; PF00607; Gag_p24; 1.
DR Pfam; PF19317; Gag_p24_C; 1.
DR Pfam; PF00098; zf-CCHC; 1.
DR Pfam; PF14787; zf-CCHC_5; 1.
DR SMART; SM00343; ZnF_C2HC; 2.
DR SUPFAM; SSF47353; Retrovirus capsid dimerization domain-like; 1.
DR SUPFAM; SSF47943; Retrovirus capsid protein, N-terminal core domain; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000288716};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00047}.
FT DOMAIN 183..198
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 214..284
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 214..232
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:RWS18818.1"
SQ SEQUENCE 284 AA; 31794 MW; 2AB85A34ED83A672 CRC64;
LARAALTGGQ YLLWKVAYQE HCQDTAQRNQ VAGNAAWNMD MLMGSGQYAG NNNQINFPPA
VYLQIATAAM RSWKTIQGTG DLQGQLSKVI QGSNEPYADF VDRLIQTASR IFGDVDAAMP
LIKQLAYEQA NKWCKEAIRP WKNRDLASYL KACKDINDSV IQANVMATTF ANLVRPSQPR
GLCYNCHKPG HLQRDCPDKG NTKFRQVCPR CRKGPHKAVD CRSTRDIDGN PLHSKNGKQG
PWSRGPQIYG AFQQVPRPMY PLTDQSEPPK EAQDWTSVPP PEQY
//
