ID A0A443STD2_9ACAR Unreviewed; 471 AA.
AC A0A443STD2;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=Heterogeneous nuclear ribonucleoprotein L-like protein {ECO:0000313|EMBL:RWS30754.1};
GN ORFNames=B4U80_04473 {ECO:0000313|EMBL:RWS30754.1};
OS Leptotrombidium deliense.
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari;
OC Acariformes; Trombidiformes; Prostigmata; Anystina; Parasitengona;
OC Trombiculoidea; Trombiculidae; Leptotrombidium.
OX NCBI_TaxID=299467 {ECO:0000313|EMBL:RWS30754.1, ECO:0000313|Proteomes:UP000288716};
RN [1] {ECO:0000313|EMBL:RWS30754.1, ECO:0000313|Proteomes:UP000288716}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=UoL-UT {ECO:0000313|EMBL:RWS30754.1};
RA Dong X., Chaisiri K., Xia D., Armstrong S.D., Fang Y., Donnelly M.J.,
RA Kadowaki T., McGarry J.W., Darby A.C., Makepeace B.L.;
RT "Genomes of trombidid mites reveal novel predicted allergens and laterally-
RT transferred genes associated with secondary metabolism.";
RL Gigascience 0:0-0(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RWS30754.1}.
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DR EMBL; NCKV01000389; RWS30754.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A443STD2; -.
DR STRING; 299467.A0A443STD2; -.
DR EnsemblMetazoa; LDEU001289-RA; LDEU001289-PA; LDEU001289.
DR VEuPathDB; VectorBase:LDEU001289; -.
DR Proteomes; UP000288716; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006397; P:mRNA processing; IEA:InterPro.
DR CDD; cd12694; RRM2_hnRNPL_like; 1.
DR CDD; cd12424; RRM3_hnRNPL_like; 1.
DR CDD; cd12427; RRM4_hnRNPL_like; 1.
DR Gene3D; 3.30.70.330; -; 3.
DR InterPro; IPR006536; HnRNP-L/PTB.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR021790; PTBP1-like_RRM2.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR NCBIfam; TIGR01649; hnRNP-L_PTB; 1.
DR PANTHER; PTHR15592; MATRIN 3/NUCLEAR PROTEIN 220-RELATED; 1.
DR PANTHER; PTHR15592:SF18; SMOOTH, ISOFORM T; 1.
DR Pfam; PF13893; RRM_5; 1.
DR Pfam; PF11835; RRM_8; 1.
DR SMART; SM00360; RRM; 3.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 3.
DR PROSITE; PS50102; RRM; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000288716};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribonucleoprotein {ECO:0000313|EMBL:RWS30754.1};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 60..137
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 263..337
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 154..260
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 154..177
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 218..259
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 471 AA; 51663 MW; EA66FC8BF0504F9E CRC64;
MATYEGHSAK RIKTDEVTIA YIIATIHLTL QDRNYNNPSY YGHTNSRYGG HPRNDERENH
VLLITVINPA YPITCDVIHQ ICSPQGKVMR VVIFKKNGVQ AMVEFDSVDS AKRAKQALHG
CDIYSGCCTL RIEFAKPTRL NVYKNDNESF DYTNPSLGMG NNRNNINAAS HQGNYAPDHS
ETAFHEGYGA APRPPAPQSY VDPYMQHPPS DPYRDGRAPV LPTPPAPGFG GAPPPPPPGG
GGAPPPMMTG QPPPPTGAPQ QGAVMMVYGL DHDKMNAERL FNLFCLYGNV VRVKFLKSKE
GCAMVQMGDP VAVERCINSL NNLTFFGKKM QLSYSKQAFL NDVQQPFELQ DGTPSFKDFM
GNRNNRFTNP EAASKNRIAP PAKVLHFFNA PHGMTDDEII SIFKSTGGPV ASGVKLFQSK
TERSSSGLIQ FESVAEAVEA LVLCNHISIP NPSGKFPFVF KLCFSSTGSR F
//
