ID A0A444XEC1_ARAHY Unreviewed; 606 AA.
AC A0A444XEC1;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE RecName: Full=Lysine--tRNA ligase {ECO:0000256|ARBA:ARBA00013166, ECO:0000256|RuleBase:RU003748};
DE EC=6.1.1.6 {ECO:0000256|ARBA:ARBA00013166, ECO:0000256|RuleBase:RU003748};
DE AltName: Full=Lysyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00030563, ECO:0000256|RuleBase:RU003748};
GN ORFNames=Ahy_B09g095340 {ECO:0000313|EMBL:RYQ87803.1}, DS421_19g642940
GN {ECO:0000313|EMBL:QHN76330.1};
OS Arachis hypogaea (Peanut).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis.
OX NCBI_TaxID=3818 {ECO:0000313|EMBL:RYQ87803.1, ECO:0000313|Proteomes:UP000289738};
RN [1] {ECO:0000313|EMBL:RYQ87803.1, ECO:0000313|Proteomes:UP000289738}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Fuhuasheng {ECO:0000313|Proteomes:UP000289738}, and
RC GDAAS-fuhuasheng2018 {ECO:0000313|EMBL:RYQ87803.1};
RC TISSUE=Leaves {ECO:0000313|EMBL:RYQ87803.1};
RA Chen X.;
RT "Sequencing of cultivated peanut Arachis hypogaea provides insights into
RT genome evolution and oil improvement.";
RL Submitted (JAN-2019) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:QHN76330.1, ECO:0000313|Proteomes:UP000464620}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Young leaf {ECO:0000313|EMBL:QHN76330.1};
RA Zhuang W., Chen H., Varshney R., Wang D., Ming R.;
RT "Genome sequence of Arachis hypogaea, cultivar Shitouqi.";
RL Submitted (JAN-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + L-lysine + tRNA(Lys) = AMP + diphosphate + L-lysyl-
CC tRNA(Lys); Xref=Rhea:RHEA:20792, Rhea:RHEA-COMP:9696, Rhea:RHEA-
CC COMP:9697, ChEBI:CHEBI:30616, ChEBI:CHEBI:32551, ChEBI:CHEBI:33019,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78529, ChEBI:CHEBI:456215; EC=6.1.1.6;
CC Evidence={ECO:0000256|ARBA:ARBA00000204,
CC ECO:0000256|RuleBase:RU003748};
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DR EMBL; CP031001; QHN76330.1; -; Genomic_DNA.
DR EMBL; SDMP01000019; RYQ87803.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A444XEC1; -.
DR STRING; 3818.A0A444XEC1; -.
DR OrthoDB; 5487299at2759; -.
DR Proteomes; UP000289738; Chromosome b09.
DR Proteomes; UP000464620; Chromosome b09.
DR GO; GO:0005737; C:cytoplasm; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0004824; F:lysine-tRNA ligase activity; IEA:UniProtKB-EC.
DR GO; GO:0006430; P:lysyl-tRNA aminoacylation; IEA:InterPro.
DR CDD; cd00775; LysRS_core; 1.
DR CDD; cd04322; LysRS_N; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR HAMAP; MF_00252; Lys_tRNA_synth_class2; 1.
DR InterPro; IPR004364; Aa-tRNA-synt_II.
DR InterPro; IPR006195; aa-tRNA-synth_II.
DR InterPro; IPR045864; aa-tRNA-synth_II/BPL/LPL.
DR InterPro; IPR002313; Lys-tRNA-ligase_II.
DR InterPro; IPR044136; Lys-tRNA-ligase_II_N.
DR InterPro; IPR018149; Lys-tRNA-synth_II_C.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR004365; NA-bd_OB_tRNA.
DR NCBIfam; TIGR00499; lysS_bact; 1.
DR PANTHER; PTHR42918:SF15; LYSINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIAL; 1.
DR PANTHER; PTHR42918; LYSYL-TRNA SYNTHETASE; 1.
DR Pfam; PF00152; tRNA-synt_2; 1.
DR Pfam; PF01336; tRNA_anti-codon; 1.
DR PRINTS; PR00982; TRNASYNTHLYS.
DR SUPFAM; SSF55681; Class II aaRS and biotin synthetases; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS50862; AA_TRNA_LIGASE_II; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00023146};
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Ligase {ECO:0000256|ARBA:ARBA00022598, ECO:0000313|EMBL:QHN76330.1};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000289738}.
FT DOMAIN 257..600
FT /note="Aminoacyl-transfer RNA synthetases class-II family
FT profile"
FT /evidence="ECO:0000259|PROSITE:PS50862"
FT REGION 41..89
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 520..551
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 41..59
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 73..87
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 606 AA; 67962 MW; 6E8610323F80A5D8 CRC64;
MEALKLWNLT SQPLKRHLLH STTSITSYAF RRTPRTLLLR SSSSSSSSST ASSSAPDVDK
PTGAASRTAG RNRRAPASPT TSTSDREAVR AIRLRKVEEL RSKGLDPYAY GWEKTHSANQ
LQDIYRDLGN GEEANGENDH VSIAGRIVAR RAFGKLAFLT LRDDSGTIQL YCDKERLIDD
QFEQLKAHVD IGDILGARGS IKRTEKGELS VCVLSFAILT KSLLPLPDKY HGLTDIDKRY
RQRYVDMIAN PEVADVFRKR AKVVSEIRRT MDSLGYIEVE TPVLQGAAGG AEARPFITHH
NSLGRDLYLR IATELHLKRM LVGGFEKVYE IGRIFRNEGI STRHNPEFTT IEMYEAYSDY
QSMMNLAEEI VTQCALAVLG KLTLDYQGVE ICLERPWRRE TMHNLVKEVS GIDFSELGYD
LEVAKKVTLS TLGNNLDAKD KASIEACQSV GHLLNEVFEV VVEPKLIQPI FVLDYPIEIS
PLAKPHRRSI GLTERFELFI CGREIGNAFS ELTDPIDQRG RLEDQVRQHE KKRAEAASRN
ADKKEGTENE DDLYEVTLDD DFLTALEYGM PPASGMGLGI DRIVMLLTNS PSIRDVIAFP
VLKVQQ
//