ID A0A444YRV9_ARAHY Unreviewed; 830 AA.
AC A0A444YRV9;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE RecName: Full=Transcription-repair-coupling factor {ECO:0008006|Google:ProtNLM};
GN ORFNames=Ahy_B06g084426 {ECO:0000313|EMBL:RYR04653.1};
OS Arachis hypogaea (Peanut).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis.
OX NCBI_TaxID=3818 {ECO:0000313|EMBL:RYR04653.1, ECO:0000313|Proteomes:UP000289738};
RN [1] {ECO:0000313|EMBL:RYR04653.1, ECO:0000313|Proteomes:UP000289738}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Fuhuasheng {ECO:0000313|Proteomes:UP000289738};
RC TISSUE=Leaves {ECO:0000313|EMBL:RYR04653.1};
RA Chen X.;
RT "Sequencing of cultivated peanut Arachis hypogaea provides insights into
RT genome evolution and oil improvement.";
RL Submitted (JAN-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RYR04653.1}.
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DR EMBL; SDMP01000016; RYR04653.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A444YRV9; -.
DR STRING; 3818.A0A444YRV9; -.
DR OrthoDB; 34695at2759; -.
DR Proteomes; UP000289738; Chromosome b06.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR CDD; cd17991; DEXHc_TRCF; 1.
DR Gene3D; 2.40.10.170; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 3.90.1150.50; Transcription-repair-coupling factor, D7 domain; 1.
DR InterPro; IPR003711; CarD-like/TRCF_RID.
DR InterPro; IPR036101; CarD-like/TRCF_RID_sf.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR037235; TRCF-like_C_D7.
DR InterPro; IPR005118; TRCF_C.
DR PANTHER; PTHR14025; FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER; 1.
DR PANTHER; PTHR14025:SF20; FANCONI ANEMIA GROUP M PROTEIN; 1.
DR Pfam; PF02559; CarD_TRCF_RID; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF03461; TRCF; 1.
DR SMART; SM01058; CarD_TRCF; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF141259; CarD-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF143517; TRCF domain-like; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000289738}.
FT DOMAIN 292..454
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 463..629
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
SQ SEQUENCE 830 AA; 94490 MW; 98125C4C0BCC9C24 CRC64;
MASLLPTPHF STPLISKLTS SPKTWKLFIL PHPLYPIALH IKKKNVLLFP TNAFYTQGVY
APSSSPSKLG NRTEKKNELE NDSIALLNER IRRDYGSREV SRTVMDSEEA DRYIQMVKEQ
QQKGLQKLKG ERKEGKDGTF SYKVDPYTLQ SGDYVVHKKV GIGRFVGIRL DVPKNSTEPT
EYVFIEYADG MAKLPLKQAS KMLYRYSLPN ENKRPRTLSK LNDISSWEKR KIKGKVAIQK
MVVDLMELYL HRLKQRRPPY SKSLAMTEFA AQFPYKPTPD QQQAFIDVER DLTERETPMD
RLICGDVGFG KTEVALRAIH CVVSAKKQAM ILAPTRVLAK QHFDVISERF SVYPDLKVGL
LSRFQTRAEK EAQLDKIKNG DLDIVVGTHS LLGDRVVYNK LGLLVIDEEQ RFGVKQKERI
ASFKTSVDVL TLSATPIPRT LYLALTGFRD ASLITTPPPE RVPIKTHLSA FSKDRVISAI
KYELDRGGQV FYVLPRIKGL EEVMYFLEES FPDVEIAIAH GKQYSRQLED TMDRFASGET
KILICTNIVE SGLDIQNANT IIIQDVQQFG LAQLYQLRGR VGRADKEAHA HLFYPDKSML
SDQALERLAA LEECHELGQG FQLAERDMAI RGFGTIFGEQ QTGDVGNVGI DLFFEMLFES
LSKVEDHRVV PVPYHSVQVD LNINPHLPSE YINYLENPMQ IINEAERVAE NDIWSLVQFT
ESLRRQFGKE PRSMEILLKK LYVRRMAADM GISGIYSSGK TIIMKTNINK KVFKIMIESM
ASETLKNSLV LEGDQIKAEL LLELPKEQLL NWLFQCLAEL HASLPALIKY
//
