ID A0A445I8W7_GLYSO Unreviewed; 1755 AA.
AC A0A445I8W7;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 27-MAR-2024, entry version 15.
DE SubName: Full=Homeobox-DDT domain protein RLT1 isoform A {ECO:0000313|EMBL:RZB82503.1};
GN ORFNames=D0Y65_031584 {ECO:0000313|EMBL:RZB82503.1};
OS Glycine soja (Wild soybean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3848 {ECO:0000313|EMBL:RZB82503.1, ECO:0000313|Proteomes:UP000289340};
RN [1] {ECO:0000313|EMBL:RZB82503.1, ECO:0000313|Proteomes:UP000289340}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. W05 {ECO:0000313|Proteomes:UP000289340};
RC TISSUE=Hypocotyl of etiolated seedlings {ECO:0000313|EMBL:RZB82503.1};
RA Xie M., Chung C.Y.L., Li M.-W., Wong F.-L., Chan T.-F., Lam H.-M.;
RT "A high-quality reference genome of wild soybean provides a powerful tool
RT to mine soybean genomes.";
RL Submitted (SEP-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RZB82503.1}.
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DR EMBL; QZWG01000011; RZB82503.1; -; Genomic_DNA.
DR OrthoDB; 394285at2759; -.
DR Proteomes; UP000289340; Chromosome 11.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR007759; Asxl_HARE-HTH.
DR InterPro; IPR018501; DDT_dom.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR044977; RLT1-3.
DR InterPro; IPR028942; WHIM1_dom.
DR InterPro; IPR028941; WHIM2_dom.
DR PANTHER; PTHR36968:SF13; HOMEOBOX-DDT DOMAIN PROTEIN RLT1; 1.
DR PANTHER; PTHR36968; HOMEOBOX-DDT DOMAIN PROTEIN RLT2; 1.
DR Pfam; PF02791; DDT; 1.
DR Pfam; PF05066; HARE-HTH; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR Pfam; PF15612; WHIM1; 1.
DR Pfam; PF15613; WSD; 1.
DR SMART; SM00571; DDT; 1.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS50827; DDT; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
DR PROSITE; PS51913; HTH_HARE; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682};
KW Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000289340};
KW Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT DOMAIN 38..98
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DOMAIN 549..608
FT /note="DDT"
FT /evidence="ECO:0000259|PROSITE:PS50827"
FT DOMAIN 731..800
FT /note="HTH HARE-type"
FT /evidence="ECO:0000259|PROSITE:PS51913"
FT DNA_BIND 40..99
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 1..51
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 98..124
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 386..435
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 829..879
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1234..1255
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1535..1603
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1714..1755
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..16
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 17..42
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 98..112
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 832..855
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 856..879
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1543..1575
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1714..1728
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1734..1755
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1755 AA; 198166 MW; 45060EFD5B317E4A CRC64;
MEAEAENNDV KKEENSNDNN NNNNNNESNS KIGNSSEGLS KPKRQMKTPF QLETLEKAYA
VENYPSETMR VELSEKLGLS DRQLQMWFCH RRLKDKKELP SKKPRKAAAL PDSPVEEPKL
GPEVGVEYGS GSGSGSSPFA RSELRNVVPR GYYESPQTIM ELRAIACVEA QLGEPLREDG
PILGVEFDPL PPDAFGAPLA VTEQQKRPSL AYDSKIYERH DARANKAIAR TFHEYPFLPN
QSGIRSDVYG QLNLPHLHDP MDGPTRTPFP LGNEQQPRVH APQSHSSHVR LLSQQQDKLV
ITYPSPPRDN DVAPKREPHT NITSTGMNSH LTDHPIVGQD NPYALAGGQV SHNDAVLRME
RKRKSDETKV AKEVEAYEMR MRKELEKQDN LRRKSEERMR KEMERQDRER RKEEERLMRE
KQREEERSRR EQRREMERRE KFLLKEHLRA EKRRQKEEIR KEKEEERRKA ALEKANARRI
AKESMELIED EQLELMELAA ASKGLSSIIH IDLDTLQNLE SFRDSLCIFP PKSVKLRKPF
AIQPWIDSEQ NIGNLLMVWR FLITFADVLD LWPFTLDEFV QAFHDYDSRL LGEIHVVLLK
VIIKDIEDVA RTPSTGLGMN QNGAANPGGG HPEIVEGAYA WGFDIRNWQK NLNQLTWPEV
FRQLALSAGL GPQLKKRNIT WSYAIDKDEG KSCKDIISTL RNGSAAESAV AKMQERGLLA
PRRSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELAEKIQK SGLRDLTTSK TPEASISVAL
TRDTKLFERI APSTYCVRDA FRKNPADADS ILSEARKKIQ IFENGFLAGE DADDVEREEE
SESDEVDEDP EDDDLVNPSS ANQNSEQYED TNICSSNGKE NLGHNVDLIQ KEFDTDLPCF
PKNGSKDADC PISVTRQPVA CEDLNASNLD QDNMEIDESK SGESWILGLT EGEYSDLSVE
ERLNALVALV GVANEGNSIR VVLEDRLESA NALKKQMWAE AQIDKVRLKD DNISKLDFPS
LTGNKVETPY TYPAMEGNLS PMLDININNI NNEASPSTAE NQKGDPVAQS MPMEKCSSIQ
DFGSGTGADI SQTQVSAQYS KRSRSQLKSY IAHIAEEMYV YRSLPLGQDR RRNRYWQFVA
SASSNDPGSG RIFVEYHDGK WRLIDSEEAF DALLTSLDSR GIRESHLRLM LLKIENSFKE
NVRKRNACCA KNGSRGEFSI KIEANEACSI PEHNAGSGSP SSTLHDLNAD PSETSSSFKI
ELGKTESEKK AALRRYQDFQ KWLWKECYNS SVLCAMKYGI KRCKPQMDIC DICLNLYFVE
DSHCNSCHQT FPSNNGFNFS KHAFQCRDKL SKDNCILEYS LPLRTRLLKV LLACMEVSVL
SEAFETNWIN DVRKHWGIKL SKSSSVEELL QILTLFERSL RRDFLSLNFS TTDELLGSSS
MSERSVQAST DPESVAVLPW VPLTTAALSL RLFEIDSSIS YVKLERLEPC EEKEAREYIK
LPSRYTHMKS NREVEPAEFV HDEFTKDKSV PKKIVRNGNK RGRGTNEQGR GKKLAKRVCN
SKRDGGRKNA KVTDNLSHRL KQQARGTQGQ GAGRGRRTIR KRRMGKRAVE DLLLGHTTAS
HSYKIDREPV RNLDEEWDGE KASPMTPVHI GVAADNSNSA EEVESDDDNA QAVEYDQGNW
EVGFNGVPPN RWSRGLVGMS DEDVDAFEEL NDNGIEENEE EDSEADVMSE GSDGIPNTVV
NVGGSDSALS EDSSD
//
