ID A0A445IV01_GLYSO Unreviewed; 365 AA.
AC A0A445IV01;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 27-MAR-2024, entry version 14.
DE SubName: Full=Splicing factor 3B subunit 4 {ECO:0000313|EMBL:RZB89906.1};
GN ORFNames=D0Y65_022748 {ECO:0000313|EMBL:RZB89906.1};
OS Glycine soja (Wild soybean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3848 {ECO:0000313|EMBL:RZB89906.1, ECO:0000313|Proteomes:UP000289340};
RN [1] {ECO:0000313|EMBL:RZB89906.1, ECO:0000313|Proteomes:UP000289340}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. W05 {ECO:0000313|Proteomes:UP000289340};
RC TISSUE=Hypocotyl of etiolated seedlings {ECO:0000313|EMBL:RZB89906.1};
RA Xie M., Chung C.Y.L., Li M.-W., Wong F.-L., Chan T.-F., Lam H.-M.;
RT "A high-quality reference genome of wild soybean provides a powerful tool
RT to mine soybean genomes.";
RL Submitted (SEP-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the SF3B4 family.
CC {ECO:0000256|ARBA:ARBA00008363}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RZB89906.1}.
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DR EMBL; QZWG01000009; RZB89906.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A445IV01; -.
DR Proteomes; UP000289340; Chromosome 9.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd12334; RRM1_SF3B4; 1.
DR CDD; cd12335; RRM2_SF3B4; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR034158; SF3B4_RRM1.
DR InterPro; IPR034159; SF3B4_RRM2.
DR PANTHER; PTHR48030; SPLICING FACTOR 3B SUBUNIT 4; 1.
DR PANTHER; PTHR48030:SF3; SPLICING FACTOR 3B, SUBUNIT 4; 1.
DR Pfam; PF00076; RRM_1; 2.
DR PRINTS; PR01217; PRICHEXTENSN.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 2.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000289340};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 25..103
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 112..191
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 253..365
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 253..271
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 289..365
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 365 AA; 39587 MW; 30F5A58981156EDC CRC64;
MTTRIAPGVG ANLLGQHAAE RNQDATAYVG NLDPQTSEEL LWELFVQAGP VVNVYVPKDR
VTNQHQGYGF VEFRSEEDAD YAIKVLNMIK LYGKPIRVNK ASQDKKSLDV GANLFIGNLD
PDVDEKLLYD TFSAFGVIVT NPKIMRDPDT GNSRGFGFIS YDSFEASDSA IEAMNGQYLC
NRQITVSYAY KKDTKGERHG TPAERVLAAS NPTTQKSRPH TLFASGPPTL PSVPQANGVA
PVPPRPFANG VAPPAIPALR PPPPQAAAFQ PMPVPGQPTW HQQQPGQTLL PPAMPPPPQV
QQFRPPHPGM QQMPPPPQAP PRPLPPPSVM ASQPPPVWRL PPPQQQGGRP LPYPQSGMPP
PPPPQ
//
