ID A0A445JNE5_GLYSO Unreviewed; 505 AA.
AC A0A445JNE5;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=Poly(A)-specific ribonuclease PARN isoform C {ECO:0000313|EMBL:RZB99980.1};
GN ORFNames=D0Y65_022389 {ECO:0000313|EMBL:RZB99980.1};
OS Glycine soja (Wild soybean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3848 {ECO:0000313|EMBL:RZB99980.1, ECO:0000313|Proteomes:UP000289340};
RN [1] {ECO:0000313|EMBL:RZB99980.1, ECO:0000313|Proteomes:UP000289340}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. W05 {ECO:0000313|Proteomes:UP000289340};
RC TISSUE=Hypocotyl of etiolated seedlings {ECO:0000313|EMBL:RZB99980.1};
RA Xie M., Chung C.Y.L., Li M.-W., Wong F.-L., Chan T.-F., Lam H.-M.;
RT "A high-quality reference genome of wild soybean provides a powerful tool
RT to mine soybean genomes.";
RL Submitted (SEP-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=a divalent metal cation; Xref=ChEBI:CHEBI:60240;
CC Evidence={ECO:0000256|ARBA:ARBA00001968};
CC -!- SIMILARITY: Belongs to the CAF1 family.
CC {ECO:0000256|ARBA:ARBA00008372}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RZB99980.1}.
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DR EMBL; QZWG01000008; RZB99980.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A445JNE5; -.
DR Proteomes; UP000289340; Chromosome 8.
DR GO; GO:0043229; C:intracellular organelle; IEA:UniProt.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR006941; RNase_CAF1.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR15092; POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1; 1.
DR PANTHER; PTHR15092:SF22; POLY(A)-SPECIFIC RIBONUCLEASE PARN; 1.
DR Pfam; PF04857; CAF1; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 3: Inferred from homology;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000289340}.
FT REGION 473..505
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 473..497
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 505 AA; 56289 MW; 8B579859BFE2ABEE CRC64;
MKNKFGEWRD GLFQEQNQED QIQGISKDSK FQVTFFEMHP ALRLNGFTSH QLKLIQLVIR
KHFKDLSYVS VNSETSGSQQ LVVYTDSKDE LNLLLKKVKE ENHRAEEKKI QAAVGFRHVI
DLLSSEQKLI VGYNCFLDIA HVYSKFIGPL PGSPDEFVAS VNKCFPHIVD TIILLNTNLM
FQEKMKRSRK SLASAFTLFC PQIAAGSRST DLGSLSHVKV DVEVDGSRSC SWNPGGKHEA
GYDAFMTGCI FAQLCSDLGI DFKLRDSSNQ LALNEKLQKY VNRLYLSWIH GDIIDLNTGN
KVADSSPSHS LKKRYPTILF ENIVIIWGFP SKLKANEVRE CISKVFGPTS VVSVFHLDAT
AAFVQFSKTE LVSDFLLVKD SLERSDGAIS VLHPLSKLLE GGNTCAANYD TYNEICGSPL
SEGLFADQAK KVGIKWKTKL TECKVASRGE EHENPSLQAN DVNTAMKNVE KTKPNTIDQL
GNASSRGQVS TFEIEDSSRV AEANL
//
