ID A0A445KC73_GLYSO Unreviewed; 2088 AA.
AC A0A445KC73;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE SubName: Full=DExH-box ATP-dependent RNA helicase DExH14 isoform A {ECO:0000313|EMBL:RZC08431.1};
GN ORFNames=D0Y65_015241 {ECO:0000313|EMBL:RZC08431.1};
OS Glycine soja (Wild soybean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3848 {ECO:0000313|EMBL:RZC08431.1, ECO:0000313|Proteomes:UP000289340};
RN [1] {ECO:0000313|EMBL:RZC08431.1, ECO:0000313|Proteomes:UP000289340}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. W05 {ECO:0000313|Proteomes:UP000289340};
RC TISSUE=Hypocotyl of etiolated seedlings {ECO:0000313|EMBL:RZC08431.1};
RA Xie M., Chung C.Y.L., Li M.-W., Wong F.-L., Chan T.-F., Lam H.-M.;
RT "A high-quality reference genome of wild soybean provides a powerful tool
RT to mine soybean genomes.";
RL Submitted (SEP-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RZC08431.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; QZWG01000006; RZC08431.1; -; Genomic_DNA.
DR SMR; A0A445KC73; -.
DR OrthoDB; 57056at2759; -.
DR Proteomes; UP000289340; Chromosome 6.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008757; F:S-adenosylmethionine-dependent methyltransferase activity; IEA:UniProt.
DR GO; GO:0010467; P:gene expression; IEA:UniProt.
DR GO; GO:0090304; P:nucleic acid metabolic process; IEA:UniProt.
DR CDD; cd18020; DEXHc_ASCC3_1; 1.
DR CDD; cd18022; DEXHc_ASCC3_2; 1.
DR CDD; cd18795; SF2_C_Ski2; 2.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 2.60.40.150; C2 domain; 2.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 4.
DR Gene3D; 1.10.3380.10; Sec63 N-terminal domain-like domain; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR035892; C2_domain_sf.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR014756; Ig_E-set.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR004179; Sec63-dom.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR47961; DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED; 1.
DR PANTHER; PTHR47961:SF13; SEC63 DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00270; DEAD; 2.
DR Pfam; PF00271; Helicase_C; 2.
DR Pfam; PF02889; Sec63; 2.
DR PIRSF; PIRSF039073; BRR2; 1.
DR SMART; SM00382; AAA; 2.
DR SMART; SM00487; DEXDc; 2.
DR SMART; SM00490; HELICc; 2.
DR SMART; SM00973; Sec63; 2.
DR SUPFAM; SSF81296; E set domains; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 4.
DR SUPFAM; SSF158702; Sec63 N-terminal domain-like; 2.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 2.
DR PROSITE; PS51194; HELICASE_CTER; 2.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:RZC08431.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022728};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000289340};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728}.
FT DOMAIN 449..631
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 666..864
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT DOMAIN 1297..1472
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 1526..1712
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 308..348
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 308..326
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 327..348
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2088 AA; 237471 MW; 5DD2864BDCF437A3 CRC64;
MLFQIPRLTN SLRDPFDVDQ YYLHRKTILH NQKPSNSASS LDESELARKI VHGWEKASSD
VRQAYKQFIG AVVDLVDGET RSEEFHEVAL TMYRLFGRPM EEEDHIDKII SDKKLELQKL
VGRTVTDAKL RQVASLAQRL LNLQPSNKNS AISFERNLDA NEDLEFGADL FFQAPARFLV
DVSLDDGDMM DFESTVSLEF HKEQYGHNVP TDHSVVNREK FNLTWLRDAC DKIVKNCNSQ
LSQDELAMAI CRVLYSEKPG EEIAGDLLDL VGDSAFETVQ IFLLHRKEIV DSIHHGLLVL
KSDKNASNAQ SRMPSYGTQV TVQTESEKQI DKLRRKEEKR NRRGVEHAGD GELSALDFSS
LHQASERKKM FDEMIGSGDK FESIAVTALP EGTVRKHFKG YEEVNIPPKP TAPLKPGEKL
IEIRELDDFA QAAFRGYKSL NRIQSRIFPT VYGTNENILV CAPTGAGKTN IAMVSILHEI
GQHFRDGYLH KEEFKIVYVA PMKALAAEVT STFSQRLSPL NMIVRELTGD MQLSKNELEE
TQMIVTTPEK WDVITRKSSD MSLSMLVKLL IIDEVHLLND DRGPVIEALV ARTLRQVEST
QTMIRIVGLS ATLPNYLEVA QFLRVNPDTG LFFFDSSYRP VPLAQQYIGI SEPNFAARNE
LLNDICYTKI ADSLRQGHQA MVFVHSRKDT AKTADKLVEL ARRNEDFELF SNNTHPQYTF
MKKEVIKSRN KDLVQLFEYG VGVHHAGMLR ADRGLTERLF SDGLLKVLVC TATLAWGVNL
PAHTVVIKGT QLYDPKAGGW RDLGMLDVMQ IFGRAGRPQF DKSGEGIIIT SHDKLAYYLR
LLTSQLPIES QFISSLKDNL NAEVALGTVT NVKEACAWLG YTYLFIRMRM NPLAYGIGWD
EVMVDPALSS KQRSLVIDAA RALDKAKMMR FDEKSGNFYC TELGRIASHF YIQYSSVETY
NEMLRRHMND SEVINMIAHS SEFENIAVRE EEQNELEMLA RTSCPLEIKG GPSNKHGKIS
ILIQLYISRG SIDSFSLVSD ASYISASLAR ITRALFEICL RRGWCEMSLF MLEYCKAVDR
QVWPHQHPLR QFDKDLSAEI LRKLEERGAD LDRLYEMEEK DIGALIRYAP GGRLVKQHLG
YFPSLQLSAT VSPITRTVLK VDLVITPVFI WKDRFHGTAQ RWWILVEDSE NDHIYHSELF
TLTKRMARGE PYKLSFTVPI FEPHPPQYYI HAISDSWLHA EAFYTITFHN LPLPEARTAH
TELLDLKPLP MSSLGNSTYE ALYKFSHFNP IQTQTFHVLY HTDNNVLLGA PTGSGKTISA
ELAMLRLFNT QPDMKVIYIA PLKAIVRERM SDWQKRLVSQ LGKKMVEMTG DYTPDLTALL
SANIIISTPE KWDGISRNWH SRSYVTKVGL MILDEIHLLG ADRGPILEVI VSRMRYISSQ
TERAVRFVGL STALANAGDL ADWLGVEEIG LFNFKPSVRP VPLEVHIQGY PGKYYCPRMN
SMNKPAYAAI CTHSPAKPVL IFVSSRRQTR LTALDLIQFA ASDEQSRQFL NLPEETLQMV
LSQVSDLNLR HTLQFGIGLH HAGLNDKDRS LVEELFANNK IQILVCTSTL AWGVNLPAHL
VIIKGTEYYD GKAKRYVDFP ITDILQMMGR AGRPQFDQHG KAVILVHEPK KSFYKKFLYE
PFPVESSLRE QLHDHINAEI ISGTICHKQD AVHYLTWTYL FRRLMVNPAY YGLEDAESEF
LNTYLSSLVQ TTFEDLEDSG CIKMDEDKVE PMMLGTIASQ YYLSYMTVSM FGSNIGPDTS
LEVFLHILSA ASEFDELPVR HNEEKYNEAL SEKVKYPVDK NRLDDPHIKA LLLFQAHFSQ
LELPISDYVT DLKSVLDQSI RVIQAMIDIC ANSGWLSSSI TCMHLLQMVM QGLWFDKESS
LWMLPCMNTD LISSLSRRGI SSVQELLDIP KAALQTVTAN FPASRLYQDL QHFPHVKMKL
KVQRKDTDGD RSRILSVRLE KTNSRRHSSR AFVPRFPKIK EEQWWLVLGN TSTSELYALK
RVSVSDHLVT SMKLPLTPAN LQGVKLILVS DCYIGFEQEH SIEELDVC
//
