ID A0A445L3C2_GLYSO Unreviewed; 827 AA.
AC A0A445L3C2;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 24-JAN-2024, entry version 16.
DE SubName: Full=Zinc finger CCCH domain-containing protein 38 isoform E {ECO:0000313|EMBL:RZC17659.1};
GN ORFNames=D0Y65_010417 {ECO:0000313|EMBL:RZC17659.1};
OS Glycine soja (Wild soybean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3848 {ECO:0000313|EMBL:RZC17659.1, ECO:0000313|Proteomes:UP000289340};
RN [1] {ECO:0000313|EMBL:RZC17659.1, ECO:0000313|Proteomes:UP000289340}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. W05 {ECO:0000313|Proteomes:UP000289340};
RC TISSUE=Hypocotyl of etiolated seedlings {ECO:0000313|EMBL:RZC17659.1};
RA Xie M., Chung C.Y.L., Li M.-W., Wong F.-L., Chan T.-F., Lam H.-M.;
RT "A high-quality reference genome of wild soybean provides a powerful tool
RT to mine soybean genomes.";
RL Submitted (SEP-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RZC17659.1}.
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DR EMBL; QZWG01000004; RZC17659.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A445L3C2; -.
DR Proteomes; UP000289340; Chromosome 4.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 3.30.1370.210; -; 1.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 1.
DR InterPro; IPR041367; Znf-CCCH_4.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR36886; PROTEIN FRIGIDA-ESSENTIAL 1; 1.
DR PANTHER; PTHR36886:SF8; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 38; 1.
DR Pfam; PF00642; zf-CCCH; 1.
DR Pfam; PF14608; zf-CCCH_2; 1.
DR Pfam; PF18044; zf-CCCH_4; 1.
DR SMART; SM00356; ZnF_C3H1; 3.
DR SUPFAM; SSF90229; CCCH zinc finger; 1.
DR PROSITE; PS50103; ZF_C3H1; 3.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000289340};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 138..165
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 197..224
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 261..288
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 138..165
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 197..224
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 261..288
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..63
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 77..142
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 242..262
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 290..352
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 668..746
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 8..23
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 103..117
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 320..350
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 711..727
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 827 AA; 91349 MW; EC92F6CE4F4D0DC9 CRC64;
MSGSGKKRSS KWDLRDDPDF SPDDSQQLRS GWSSAGDKLK PGMGFSSKEP FSGGRGSNKD
DIMNKDYRVL DATMEWDEDG SYNNEMSPGL EGWKHNKRHS QSPKNGWSRS VRSSRSRSPP
HGFRWDSGVN DRNRMRAGGS TQPCRDFAAG KCRRGSHCHF LHDNQNHEDS WEDKYREDGA
PRYSAPHEGR DYSLKSGRSN EACINFPKGR CRMGASCKFV HHNNSDGHSK VSVDELARER
EIDRRHRDSS FEQGGGHGPN RSGDTLCKFF ANGHCRNGKY CRFSHDRQAC RSPNRRSRDD
RWASNPGGDY NMLDRPKLSD SVSPNRRPRD DRWGSDGNRA DADKVWDSPK RNDTVAVSDT
AKLVEDKSEN VVAAEQGFTP LATRDGWGHS LDKSRVHGEQ PFSSDKKEAD SWITGNNAAN
MHGSQSIGTD IWLGDDAKMS PDWDYRVRSS SCIEEKHEQN KHGITQGFMY LDTSEHDRIQ
IAPGQGFNQN AVSFNSLHSS SCQAVGQSQV AVPILPSKGG IVDGMLKQEV STEKKYTAEP
NIMDAGLSQV SSRNPPPTAN VVGKEQLAQL TNLSASLAHI LGTGQQLPQL YAALNSHDAK
DISSLAKTEV PAMPVSNTFI RPDPTVGLLK QYDPMCDSVE PKSAVASGVP PAIPPSQKVA
DVVEIPSQSN TGRQNCGDSS KAAGSEELVK SDPLIQLQPG QNTGVNKEML PEETLKSKDD
PKSTKESGPF ENMEQTDGPD EAKKIKGMKG NRAFKFALVE FVKELLKPTW KDGQITKEDY
KTIVKKVVDK VTGSMQGVNI PQTQEKIDHY LSFSKPKLNK LVQVSGG
//
