ID A0A445LRE3_GLYSO Unreviewed; 1021 AA.
AC A0A445LRE3;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
GN ORFNames=D0Y65_004466 {ECO:0000313|EMBL:RZC25774.1};
OS Glycine soja (Wild soybean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3848 {ECO:0000313|EMBL:RZC25774.1, ECO:0000313|Proteomes:UP000289340};
RN [1] {ECO:0000313|EMBL:RZC25774.1, ECO:0000313|Proteomes:UP000289340}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. W05 {ECO:0000313|Proteomes:UP000289340};
RC TISSUE=Hypocotyl of etiolated seedlings {ECO:0000313|EMBL:RZC25774.1};
RA Xie M., Chung C.Y.L., Li M.-W., Wong F.-L., Chan T.-F., Lam H.-M.;
RT "A high-quality reference genome of wild soybean provides a powerful tool
RT to mine soybean genomes.";
RL Submitted (SEP-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC Evidence={ECO:0000256|ARBA:ARBA00001556};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RZC25774.1}.
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DR EMBL; QZWG01000002; RZC25774.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A445LRE3; -.
DR Proteomes; UP000289340; Chromosome 2.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR CDD; cd17917; DEXHc_RHA-like; 1.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR InterPro; IPR048333; HA2_WH.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR18934:SF237; ATP-DEPENDENT DNA_RNA HELICASE DHX36; 1.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF21010; HA2_C; 1.
DR Pfam; PF04408; HA2_N; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF07717; OB_NTP_bind; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000313|EMBL:RZC25774.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000289340};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 281..448
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 512..687
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 48..85
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1021 AA; 113908 MW; BAE86A6CC6086A21 CRC64;
MPRCLYRPTF YYSHTHLPLT FLHPPAPELS PTHLRISSSV MAYRPNYRGG GGSGASSSAA
RGGSRRGGGG GRGGGSGGRG GRGEQRWWDP VWRAERLRQQ QAEKEVLDEN EWWDKIEKMK
RGGEQEMVIK RNFSIADQKT LADIAYQHEL YFHAYSKGKV LIVSKVPLPD YRADLDERHG
STQKEIKMST DIERRVGNLL NSSQSTGATL SSLPSISADL GQKQSAAPIK YVSSRQTDSS
KEKLSVALKE RQELVQASDS LKEMKSFREK LPAFKMKSEF LKAVQENQVL VVSGETGCGK
TTQLPQFLLE EEISCLRGAD CNIICTQPRR VSAISVAARI SAERGESLGE AVGYQIRLES
KRSAETRLLF CTTGVLLRQL VQDPDLTGVS HLLVDEIHER GMNEDFLIII LRDLLPRRPD
LRLILMSATI NADMFSKYFA NAPTMHILGF TYPVAEHFLE DVLEKTRYSI KSDFDNFEGN
SRRRRKQQDS KKDPLTEMFE ACIFDPSIHD IDVDTNYKNY SLGVRKSLEA WSGSQIDLGL
VEATIEYICR NEAGGAILVF LTGWDEISKL LDKLKGNNLV GDPSKKIVLA TNIAESSITI
DDVVYVIDWG KAKETSYDAL NKLACLLPSW ISKASAHQRR GRAGRVQPGV CYRLYPKLIH
DAMPQYQLAE ILRTPLQELC LHIKSLQLGT VGSFLEKALQ PPDPLAVKNA IELLKTIGAL
DEQEELTPLG QHLCNIPLDP NIGKMLLMGS IFQCLNPALT IAASLAYRNP FVLPINRKEE
ADAAKQFFAG DSCSDHIALL KAFEGWKEAK RSGNEKQFCW DNFLSPATLR LIDDMRMQFL
NLLSDIGFVD KSRGANVYNQ YSHDLEMVCA ILCAGLYPNV VQCKRRGKRT AFYTKEVGKV
DIHPASVNAG IYLFPLPYMV YSEKVKTTSI YIRDSTNISD YALLLFGGNL VPSKSGEGID
MLGGYLHFSA SKSVIELIRK LRGELDKLLN RKIEEPGFDV SAEGKGVVAA AVELLHSQVM
R
//
