GenomeNet

Database: UniProt
Entry: A0A452FWV6_CAPHI
LinkDB: A0A452FWV6_CAPHI
Original site: A0A452FWV6_CAPHI 
ID   A0A452FWV6_CAPHI        Unreviewed;       510 AA.
AC   A0A452FWV6;
DT   08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT   08-MAY-2019, sequence version 1.
DT   24-JAN-2024, entry version 21.
DE   RecName: Full=Tubby-like protein {ECO:0000256|RuleBase:RU361125};
GN   Name=TUB {ECO:0000313|Ensembl:ENSCHIP00000028792.1};
OS   Capra hircus (Goat).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC   Caprinae; Capra.
OX   NCBI_TaxID=9925 {ECO:0000313|Ensembl:ENSCHIP00000028792.1, ECO:0000313|Proteomes:UP000291000};
RN   [1] {ECO:0000313|Ensembl:ENSCHIP00000028792.1, ECO:0000313|Proteomes:UP000291000}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Bickhart D.M., Koren S., Rosen B., Hastie A., Liachko I., Sullivan S.T.,
RA   Burton J., Sayre B.L., Huson H.J., Lee J., Lam E., Kelley C.M.,
RA   Hutchison J.L., Zhou Y., Sun J., Crisa A., Schwartz J.C., Hammond J.A.,
RA   Schroeder S.G., Liu G.E., Dunham M., Shendure J., Sonstegard T.S.,
RA   Phillippy A.M., Van Tassell C.P., Smith T.P.;
RT   "Polished mammalian reference genomes with single-molecule sequencing and
RT   chromosome conformation capture applied to the Capra hircus genome.";
RL   Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSCHIP00000028792.1}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (SEP-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Secreted {ECO:0000256|ARBA:ARBA00004613}.
CC   -!- SIMILARITY: Belongs to the TUB family. {ECO:0000256|ARBA:ARBA00007129,
CC       ECO:0000256|RuleBase:RU361125}.
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DR   EMBL; LWLT01000015; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   RefSeq; XP_017914983.1; XM_018059494.1.
DR   AlphaFoldDB; A0A452FWV6; -.
DR   STRING; 9925.ENSCHIP00000028792; -.
DR   Ensembl; ENSCHIT00000036662.1; ENSCHIP00000028792.1; ENSCHIG00000024174.1.
DR   GeneID; 102184640; -.
DR   CTD; 7275; -.
DR   GeneTree; ENSGT00940000158372; -.
DR   OrthoDB; 603296at2759; -.
DR   Proteomes; UP000291000; Chromosome 15.
DR   Bgee; ENSCHIG00000024174; Expressed in cerebellum and 17 other cell types or tissues.
DR   GO; GO:0005929; C:cilium; IEA:Ensembl.
DR   GO; GO:0005829; C:cytosol; IEA:Ensembl.
DR   GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR   GO; GO:0005634; C:nucleus; IEA:Ensembl.
DR   GO; GO:0001664; F:G protein-coupled receptor binding; IEA:Ensembl.
DR   GO; GO:0120160; F:intraciliary transport particle A binding; IEA:Ensembl.
DR   GO; GO:0042073; P:intraciliary transport; IEA:Ensembl.
DR   GO; GO:0006910; P:phagocytosis, recognition; IEA:Ensembl.
DR   GO; GO:0045494; P:photoreceptor cell maintenance; IEA:Ensembl.
DR   GO; GO:0050766; P:positive regulation of phagocytosis; IEA:Ensembl.
DR   GO; GO:1903546; P:protein localization to photoreceptor outer segment; IEA:Ensembl.
DR   GO; GO:0097500; P:receptor localization to non-motile cilium; IEA:Ensembl.
DR   GO; GO:0008277; P:regulation of G protein-coupled receptor signaling pathway; IEA:Ensembl.
DR   GO; GO:0060041; P:retina development in camera-type eye; IEA:Ensembl.
DR   GO; GO:0007605; P:sensory perception of sound; IEA:Ensembl.
DR   InterPro; IPR025659; Tubby-like_C.
DR   InterPro; IPR000007; Tubby_C.
DR   InterPro; IPR018066; Tubby_C_CS.
DR   InterPro; IPR005398; Tubby_N.
DR   PANTHER; PTHR16517:SF20; TUBBY PROTEIN HOMOLOG; 1.
DR   PANTHER; PTHR16517; TUBBY-RELATED; 1.
DR   Pfam; PF01167; Tub; 1.
DR   Pfam; PF16322; Tub_N; 1.
DR   PRINTS; PR01573; SUPERTUBBY.
DR   PRINTS; PR01574; TUBBYPROTEIN.
DR   SUPFAM; SSF54518; Tubby C-terminal domain-like; 1.
DR   PROSITE; PS01200; TUB_1; 1.
DR   PROSITE; PS01201; TUB_2; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000291000};
KW   Secreted {ECO:0000256|ARBA:ARBA00022525}.
FT   DOMAIN          35..241
FT                   /note="Tubby N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF16322"
FT   DOMAIN          261..505
FT                   /note="Tubby C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF01167"
FT   REGION          40..79
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          100..249
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        156..170
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        212..238
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   510 AA;  55797 MW;  C3F0E996B4BD2BE8 CRC64;
     MEGVSSHRTL SYSRWSYDSV LDDEGSNLRQ QKLDRQRALL EQKQKKKRQE PLMVQANADG
     RPRSRRARQS EEQAPLVESY LSGSTGYQVQ EADSVASVPL GAAHPTAPAS AKRTKAAAAA
     GGQGGASRKE KKGKHKGSGG PAAPAEDKSE ARGPVQILTV GQSDQAQDTG ETAAGGGARP
     GGQDIHGTMQ RKGISSSMSF EEEEEEEEEN SSSSSQLNSN TRPSSATSRK STREAASAPS
     PTAPEPSVDV EVQDLEEFAL RPAPQGITVK CRITRDKKGM DRGMYPTYFL HLDREDGKKV
     FLLAGRKRKK SKTSNYLISV DPTDLSRGGD SYIGKLRSNL MGTKFTVYDN GVNPQKASAS
     TLESGTLRQE LAAVCYETNV LGFKGPRKMS VIVPGMTMVH ERVSIRPRNE HETLLARWQN
     KNTESIIELQ NKTPVWNDDT QSYVLNFHGR VTQASVKNFQ IIHGNDPDYI VMQFGRVAED
     VFTMDYNYPL CALQAFAIAL SSFDSKLACE
//
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