GenomeNet

Database: UniProt
Entry: A0A452G1Y8_CAPHI
LinkDB: A0A452G1Y8_CAPHI
Original site: A0A452G1Y8_CAPHI 
ID   A0A452G1Y8_CAPHI        Unreviewed;       276 AA.
AC   A0A452G1Y8;
DT   08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT   08-MAY-2019, sequence version 1.
DT   24-JAN-2024, entry version 17.
DE   RecName: Full=PDZ and LIM domain protein 3 {ECO:0000256|ARBA:ARBA00039371};
GN   Name=PDLIM3 {ECO:0000313|Ensembl:ENSCHIP00000030463.1};
OS   Capra hircus (Goat).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC   Caprinae; Capra.
OX   NCBI_TaxID=9925 {ECO:0000313|Ensembl:ENSCHIP00000030463.1, ECO:0000313|Proteomes:UP000291000};
RN   [1] {ECO:0000313|Ensembl:ENSCHIP00000030463.1, ECO:0000313|Proteomes:UP000291000}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Bickhart D.M., Koren S., Rosen B., Hastie A., Liachko I., Sullivan S.T.,
RA   Burton J., Sayre B.L., Huson H.J., Lee J., Lam E., Kelley C.M.,
RA   Hutchison J.L., Zhou Y., Sun J., Crisa A., Schwartz J.C., Hammond J.A.,
RA   Schroeder S.G., Liu G.E., Dunham M., Shendure J., Sonstegard T.S.,
RA   Phillippy A.M., Van Tassell C.P., Smith T.P.;
RT   "Polished mammalian reference genomes with single-molecule sequencing and
RT   chromosome conformation capture applied to the Capra hircus genome.";
RL   Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSCHIP00000030463.1}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (SEP-2023) to UniProtKB.
CC   -!- FUNCTION: May play a role in the organization of actin filament arrays
CC       within muscle cells. {ECO:0000256|ARBA:ARBA00037484}.
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DR   EMBL; LWLT01000029; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   RefSeq; XP_005698784.1; XM_005698727.3.
DR   AlphaFoldDB; A0A452G1Y8; -.
DR   Ensembl; ENSCHIT00000038335.1; ENSCHIP00000030463.1; ENSCHIG00000025204.1.
DR   GeneID; 100861269; -.
DR   CTD; 27295; -.
DR   GeneTree; ENSGT00940000156741; -.
DR   OrthoDB; 370973at2759; -.
DR   Proteomes; UP000291000; Chromosome 27.
DR   Bgee; ENSCHIG00000025204; Expressed in longissimus thoracis muscle and 15 other cell types or tissues.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   CDD; cd09450; LIM_ALP; 1.
DR   CDD; cd00992; PDZ_signaling; 1.
DR   Gene3D; 2.30.42.10; -; 1.
DR   Gene3D; 2.10.110.10; Cysteine Rich Protein; 1.
DR   InterPro; IPR031847; PDLI1-4/Zasp-like_mid.
DR   InterPro; IPR001478; PDZ.
DR   InterPro; IPR036034; PDZ_sf.
DR   InterPro; IPR001781; Znf_LIM.
DR   PANTHER; PTHR24214:SF7; PDZ AND LIM DOMAIN PROTEIN 3; 1.
DR   PANTHER; PTHR24214; PDZ AND LIM DOMAIN PROTEIN ZASP; 1.
DR   Pfam; PF15936; DUF4749; 1.
DR   Pfam; PF00412; LIM; 1.
DR   Pfam; PF00595; PDZ; 1.
DR   SMART; SM00132; LIM; 1.
DR   SMART; SM00228; PDZ; 1.
DR   SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 2.
DR   SUPFAM; SSF50156; PDZ domain-like; 1.
DR   PROSITE; PS00478; LIM_DOMAIN_1; 1.
DR   PROSITE; PS50023; LIM_DOMAIN_2; 1.
DR   PROSITE; PS50106; PDZ; 1.
PE   4: Predicted;
KW   LIM domain {ECO:0000256|ARBA:ARBA00023038, ECO:0000256|PROSITE-
KW   ProRule:PRU00125};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW   ProRule:PRU00125}; Reference proteome {ECO:0000313|Proteomes:UP000291000};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00125}.
FT   DOMAIN          9..84
FT                   /note="PDZ"
FT                   /evidence="ECO:0000259|PROSITE:PS50106"
FT   DOMAIN          204..263
FT                   /note="LIM zinc-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS50023"
SQ   SEQUENCE   276 AA;  30300 MW;  2243ECF0CE5E1AB3 CRC64;
     MPQNVVLPGP APWGFRLSGG IDFNQPLVIT RITPGSKAAA ANLCPGDVIL AIDGFGTESM
     THADAQDRIK AAGHQLCLKV DRAEARLWSP QVTEDGKAHP FKINLESEPQ DVNYFEHKHN
     VRPKPFIIPG RSSEPTASVP PESDVYRMLH DNRNEPSQPR QSGSFRVLQE LVNDGPDDRP
     AGTRSVRAPV TKVHGGAGGT QKMPFCDKCG SGIVGAVVKA RDKYRHPECF VCADCNLNLK
     QKGYFFVEGE LYCETHARAR MRPPEGYDTV TLYPKA
//
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