ID A0A452GH00_9SAUR Unreviewed; 885 AA.
AC A0A452GH00;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 24-JAN-2024, entry version 21.
DE RecName: Full=Helicase ATP-binding domain-containing protein {ECO:0000259|PROSITE:PS51193};
OS Gopherus agassizii (Agassiz's desert tortoise).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira;
OC Testudinoidea; Testudinidae; Gopherus.
OX NCBI_TaxID=38772 {ECO:0000313|Ensembl:ENSGAGP00000000861.1, ECO:0000313|Proteomes:UP000291020};
RN [1] {ECO:0000313|Proteomes:UP000291020}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=28562605;
RA Tollis M., DeNardo D.F., Cornelius J.A., Dolby G.A., Edwards T.,
RA Henen B.T., Karl A.E., Murphy R.W., Kusumi K.;
RT "The Agassiz's desert tortoise genome provides a resource for the
RT conservation of a threatened species.";
RL PLoS ONE 12:e0177708-e0177708(2017).
RN [2] {ECO:0000313|Ensembl:ENSGAGP00000000861.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the DEAD box helicase family. DEAH subfamily.
CC DDX11/CHL1 sub-subfamily. {ECO:0000256|ARBA:ARBA00008435}.
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DR AlphaFoldDB; A0A452GH00; -.
DR Ensembl; ENSGAGT00000000978.1; ENSGAGP00000000861.1; ENSGAGG00000000211.1.
DR Proteomes; UP000291020; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003678; F:DNA helicase activity; IEA:InterPro.
DR GO; GO:0016818; F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd18788; SF2_C_XPD; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR InterPro; IPR006555; ATP-dep_Helicase_C.
DR InterPro; IPR045028; DinG/Rad3-like.
DR InterPro; IPR014013; Helic_SF1/SF2_ATP-bd_DinG/Rad3.
DR InterPro; IPR006554; Helicase-like_DEXD_c2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR010614; RAD3-like_helicase_DEAD.
DR InterPro; IPR013020; Rad3/Chl1-like.
DR NCBIfam; TIGR00604; rad3; 1.
DR PANTHER; PTHR11472:SF41; ATP-DEPENDENT DNA HELICASE DDX11-RELATED; 1.
DR PANTHER; PTHR11472; DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER; 1.
DR Pfam; PF06733; DEAD_2; 1.
DR Pfam; PF13307; Helicase_C_2; 1.
DR SMART; SM00488; DEXDc2; 1.
DR SMART; SM00491; HELICc2; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51193; HELICASE_ATP_BIND_2; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000291020}.
FT DOMAIN 8..433
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51193"
FT REGION 77..97
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 82..97
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 885 AA; 100193 MW; 569DA345F672CB32 CRC64;
RSAAVGKGRV NFPFPYTPYS IQEDFMANLY DVLEAGKVGI FESPTGTGKS LSLICGALSW
LRDFEEKKKQ EEARLLADEH SGQDKQQQPT SCSAEASNCQ GSAGELVWIT EFMQKKEEQA
MVDRLKEEQI RRKKREDRLE KIRHNVQLKY ASKRKRLEDD ETQRLLQLSK EILSTELGSD
VLEQLDHEEE ELILAEYESD EEKKGRQTAL LEFLQSSFSF SSQIYYCSRT HSQLAQFVHE
VQKSPFGEEI RLVSLGSRQN LCVNEEVRHL GAVQLINDRC VEMQKNKHEE SEGKKRRVSR
AVCPFYSYEQ MQFLRDEVLV KVKDIEQLVA LGKETKACPY YGSRYAIPAA QLVVLPYQML
LHESTRCASG IKLKDQVVII DEAHNLIDTI TCIYSAEVRG SQLCCAHSQL LQYMERYRKR
LKAKNLMYIK QILYLLERFV SILGGNVNQN PNAQSISQAG TELKSINDFL FQSQIDNINL
FKLFGFVERY GATSVVKINK EKQKMAGLQN FLLTLHQGPD KGEFRCRVED GQPKMASPLM
QIEGFLSALT SANQDGRVIL NRQGTVAKSS LKFLLLNPAV HFAKVLKECR AAIVAGGTMQ
PVSDFREQLL SCAIGADRVV EFSCGHVIPP DNILPIILCS GPSNQQLEFT YQKRDLPHMM
DEMGRILGNL CNVVPGGVVC FFPSYEYEKQ VYTHWEGTGL LTRLATKKKI FQEPKKANQV
EQVLAEYTKC IKRCSQVGGH VTGALLFSVV GGKMSEGINF SDDLGRCVVM VGMPYPNIKS
PELQEKMAYL DKTMPRTAGQ PPSKMLIENL CMKAVNQSIG RAIRHQKDFA SILLVDHRYA
RPSVFNKLPQ WIKERTEIKY TFGLAFAALR KVSQKPPEGD GRALC
//