ID A0A452H5P5_9SAUR Unreviewed; 719 AA.
AC A0A452H5P5;
DT 08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT 08-MAY-2019, sequence version 1.
DT 24-JAN-2024, entry version 20.
DE RecName: Full=Zinc finger CCHC domain-containing protein 8 {ECO:0000256|ARBA:ARBA00022379};
DE AltName: Full=TRAMP-like complex RNA-binding factor ZCCHC8 {ECO:0000256|ARBA:ARBA00032546};
OS Gopherus agassizii (Agassiz's desert tortoise).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira;
OC Testudinoidea; Testudinidae; Gopherus.
OX NCBI_TaxID=38772 {ECO:0000313|Ensembl:ENSGAGP00000009979.1, ECO:0000313|Proteomes:UP000291020};
RN [1] {ECO:0000313|Proteomes:UP000291020}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=28562605;
RA Tollis M., DeNardo D.F., Cornelius J.A., Dolby G.A., Edwards T.,
RA Henen B.T., Karl A.E., Murphy R.W., Kusumi K.;
RT "The Agassiz's desert tortoise genome provides a resource for the
RT conservation of a threatened species.";
RL PLoS ONE 12:e0177708-e0177708(2017).
RN [2] {ECO:0000313|Ensembl:ENSGAGP00000009979.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleoplasm
CC {ECO:0000256|ARBA:ARBA00004642}.
CC -!- SIMILARITY: Belongs to the ZCCHC8 family.
CC {ECO:0000256|ARBA:ARBA00007497}.
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DR AlphaFoldDB; A0A452H5P5; -.
DR STRING; 38772.ENSGAGP00000009979; -.
DR Ensembl; ENSGAGT00000011457.1; ENSGAGP00000009979.1; ENSGAGG00000007842.1.
DR Proteomes; UP000291020; Unassembled WGS sequence.
DR GO; GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR InterPro; IPR006568; PSP_pro-rich.
DR InterPro; IPR001878; Znf_CCHC.
DR PANTHER; PTHR13316:SF0; ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 8; 1.
DR PANTHER; PTHR13316; ZINC FINGER, CCHC DOMAIN CONTAINING 8; 1.
DR Pfam; PF04046; PSP; 1.
DR Pfam; PF00098; zf-CCHC; 1.
DR SMART; SM00581; PSP; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Reference proteome {ECO:0000313|Proteomes:UP000291020};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 226..241
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 406..433
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 456..524
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 548..578
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 43..70
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 406..431
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 462..494
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 495..518
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 548..576
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 719 AA; 79809 MW; 16774B862ED5BCA2 CRC64;
MAAEVDFGDR ELFEQLDGDE AAAPTAQPLH TRFEEDVELE EAGEALRERL RDSEEMVRQL
RSENQELRRK LKILTRPSGL SVDSSKLDGP LLQILFMNNI ISKQYHQEIE DFISSLVQKY
EEQQKAEPER THFNVKPQPS SILLEEDHKV TSSNTIKKIK EAFSVVGSVL YFTNFCLDKL
GQPILNENPQ LTEGWEIPKY QQVFSQILSL DGQEIQVKAK RPKPHCFNCG SEEHQMKECP
KPRNATRISE KRREFMEACG EASNQNFQQR YHADEVEERF GKFKPGIISE ELQDALGVTD
KSLPPFIYRM RQLGYPPGWL KEAELEDSGL ALYDGKDATG GDTEDERPYQ QNKCVTYDVS
KLINYPGFNM STPSGISDEW RIFGSIPMQP SQQKDIFASY LSNFRAPSPK SSNKRSAYPS
SSHNSKKVKG DNSAVSVADM DMDSDLEMPH SSLAYDSFQF QPPLPPGSPS IATPPPLPRG
TPPCTPPNFT SPLPPAPTAS LHRNSPASTP SSDSAQPGVG DSAMDEDTLT LEELEEQQRL
IWAALEQADS TNSDSDIPAE TPLTGNSVTS SPSRNELDIV PEGRTSEKLV GMEIGISDTS
MQISRNEHSK SDPNSGDGLL DLKEGDTDHV DSEGILENSI IGSKCEVNNG GNEGVTHVIT
STELSPKNSN PVPDMSKFAA GITPFEFENM AESTGVYLRI RSVLKNSPRN QQKNKKASD
//