GenomeNet

Database: UniProt
Entry: A0A452J1U0_9SAUR
LinkDB: A0A452J1U0_9SAUR
Original site: A0A452J1U0_9SAUR 
ID   A0A452J1U0_9SAUR        Unreviewed;      1919 AA.
AC   A0A452J1U0;
DT   08-MAY-2019, integrated into UniProtKB/TrEMBL.
DT   08-MAY-2019, sequence version 1.
DT   24-JAN-2024, entry version 21.
DE   RecName: Full=PHD-type domain-containing protein {ECO:0000259|PROSITE:PS51805};
OS   Gopherus agassizii (Agassiz's desert tortoise).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira;
OC   Testudinoidea; Testudinidae; Gopherus.
OX   NCBI_TaxID=38772 {ECO:0000313|Ensembl:ENSGAGP00000034349.1, ECO:0000313|Proteomes:UP000291020};
RN   [1] {ECO:0000313|Proteomes:UP000291020}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=28562605;
RA   Tollis M., DeNardo D.F., Cornelius J.A., Dolby G.A., Edwards T.,
RA   Henen B.T., Karl A.E., Murphy R.W., Kusumi K.;
RT   "The Agassiz's desert tortoise genome provides a resource for the
RT   conservation of a threatened species.";
RL   PLoS ONE 12:e0177708-e0177708(2017).
RN   [2] {ECO:0000313|Ensembl:ENSGAGP00000034349.1}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (SEP-2023) to UniProtKB.
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DR   STRING; 38772.ENSGAGP00000034350; -.
DR   Ensembl; ENSGAGT00000038880.1; ENSGAGP00000034338.1; ENSGAGG00000024403.1.
DR   Ensembl; ENSGAGT00000038882.1; ENSGAGP00000034340.1; ENSGAGG00000024403.1.
DR   Ensembl; ENSGAGT00000038885.1; ENSGAGP00000034343.1; ENSGAGG00000024403.1.
DR   Ensembl; ENSGAGT00000038888.1; ENSGAGP00000034346.1; ENSGAGG00000024403.1.
DR   Ensembl; ENSGAGT00000038891.1; ENSGAGP00000034349.1; ENSGAGG00000024403.1.
DR   Ensembl; ENSGAGT00000038892.1; ENSGAGP00000034350.1; ENSGAGG00000024403.1.
DR   Proteomes; UP000291020; Unassembled WGS sequence.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR   InterPro; IPR034732; EPHD.
DR   InterPro; IPR001965; Znf_PHD.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   PANTHER; PTHR14955; RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20; 1.
DR   PANTHER; PTHR14955:SF6; RETINOIC ACID-INDUCED PROTEIN 1; 1.
DR   Pfam; PF13771; zf-HC5HC2H; 1.
DR   SMART; SM00249; PHD; 1.
DR   PROSITE; PS51805; EPHD; 1.
PE   4: Predicted;
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Reference proteome {ECO:0000313|Proteomes:UP000291020};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT   DOMAIN          1793..1915
FT                   /note="PHD-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51805"
FT   REGION          1..39
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          177..237
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          261..282
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          318..397
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          442..492
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          516..550
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          638..661
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          789..811
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          871..915
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          990..1009
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1189..1239
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1283..1302
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1504..1597
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1732..1786
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1809..1828
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        177..235
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        318..368
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        380..397
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        459..490
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        900..915
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1512..1534
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1535..1557
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1558..1586
FT                   /note="Basic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1749..1767
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1919 AA;  210611 MW;  095363089DC9FAA3 CRC64;
     MQSFRERCGF HGNQQNYQQT SQDTSRLENY RHQSQAGPNC ERQRLVAKEY YSQQQLPYPG
     YENSAVEKYH RGNKQLPGQQ LQGRPAFSNY AVQENSPYPA RYSGEESLQP WGAQQQSLAG
     GVAKYEENLM KKSPAPAGSR QYHEQTAQLP FRTHSLHLPQ QPPQPPALTY PKLQRQKIQN
     DVSSPMSFSQ TGHFTQHSQS QFPASSTYSS VPGGSQAAHS YKSCTAPSSQ QHERPLGGAA
     NLASGQRVQN LHGYQANRIS YDQQQQPQQQ PQQQPLQGRH HAQETLHYQN LAKYQHYNQP
     GQTYCQTDAP VRTPEQYYQT FSPSSSHSPA RSVGRSPSYS STPSPLMPNL ENFQYSQQSL
     NTGSFPAGIT DHSHFMPLLN PSPTDGTSPD AQSGNCKNLQ KEKIPENLLS DLSLQSLTAL
     TSQVENISNT VQQLLLSKSA VPQKKGIKNP PRTPEQLKGQ HCSPESSTYS AEQVGTPLSD
     PLSTPQSVHA EAQDADYLSG SEDQLERNFL YCGQSRSPAR VNSNSKAKPE SVSTCSVTSP
     DDMSTKSDDS FQSIHASLPL ETFTKYMTNE RECPRLLLST LSQEELASEI IVLQDAINEK
     ADKAWANSPA LNKDSAKSPF HVENHRTCLD SMVKSTWSNQ GNSGTHTEPL KLDKASGGNN
     SKDFSEEVYE NAQVEFTTTE TKNALKVTGS LAYNSKPNIP AATSSSGAAS YSCYSNTTAN
     SVDSENAMES FDWPDESISE SCLRWKELGP CLQSSDLSKG LFHSKLAGSC EEKKNACCMD
     ICDGEQPAKN EQAEDFSQQQ MGEEEEDTLT YDEATKADSE RWLEDTRHCC SGGDFSEIPM
     ISSPDLKESD LEPEEYSSLC ELASSEQKSV IYDTSPPKPP ENAAVLSSKD VPVSAEETVS
     AVEKENSGPS SRLSGQSVIL LGPAVGTETK VKSWFESSLP HIKPEEDTTV GESVLQEKTE
     TETTLLVKVK KQMLPENLLV KSESISRGKT LRSKRVHSRL SEGEESRKPV PSLFKDIQAA
     GMVANTCVGP DGPMETTSKN AHGQTPRFPN EGLPARMCTR SFTALSEPRM PAPLEGLKVL
     AHQEKLGKKP VCGMKQRVAF KARKRTGRPA PKVVQNPSDP LSLLVPNLVQ NEDFIGQNAK
     GLEPHDAEVK DQRSMILRSR TKTQEVYTKR RREKRTAEVR IKNCKTPKKL LSNNHLPPTF
     KITPQGGPHK EGKVGKRMKL PKSGPGMSSK MSERPLHSLK RKSTFVSPIP TKKRNLVLRS
     SSSSTKEEKA EASPNLFKRM PSTKKARAKL PTKSSCEAAL MPPPAKEPPN VCIKITSRAA
     FQGAMKTKVL PPRKGRGLKL EAIVQKITSP NLKKFACKTA AVTATAHSNP LSPAGAEKEQ
     ALKNASVTPA VGEAGPLNQG MAQKAPAASV AEQLCRNSNN RSLKGKLMNS KKLSSDCFKG
     EAYSSPETVQ YNSSSMAAKS ISVLPKKRNR KGKAAAFSVA KNPLDRRAHL APALLLTARE
     RAGAGDALGN GDDGQRDGKK PKTEDKDFAK KEPPEGRSSQ TQTRAQKQRA NHSNYNGYSK
     RQRKRHTHSK AKNVASRCKS RAKRRRQQQA PLLNPTEPEI RLKYISCKRL RTDSRAPPFS
     PYVRVEKHNE FTTTCTVINS AGEEARLRKE QQPSSSAQAL LPGGASLQPK AALPLSSTMH
     LGPVVSKALN AACLVCCLCR NPANYKDLGD LCGPYYPEHC LPKKKSRLKE KIKVEGPSEE
     APVPSPAERT LKTTDNNCTT STISGKPPRL DSAADSAKQS ALRSSSRGMF RKLQSCYCCD
     ERTEGEEAAE KPRRHECNKA ESPSQESVGD TQEHWVHEAC AVWTAGVYLV AGKLYGLQEA
     IKVAAEVRCS SCQQAGATVG CCHKGCVQTY HYACAIDTGC LLTEENFSLK CPKHKRQPL
//
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